RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RUBCNLQ9H714 662 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 CCL27Q9Y4X3 112 aa12.62□□□□□ -0.39
CPNE1-201ENST00000317677 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 C9JVG2 144 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 HAT1O14929 419 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 MID1O15344 667 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PRAMEF4O60810 478 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 FTH1P02794 183 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 C8GP07360 202 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CTRB1P17538 263 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 LBPP18428 481 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 GGT5P36269 586 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 SLC6A12P48065 614 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PIK3CGP48736 1102 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 COPZ1P61923 177 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■□□□ 13.7
CPNE1-201ENST00000317677 AGBL4Q5VU57 503 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PRAMEF9Q5VWM5 478 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 REP15Q6BDI9 236 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 TMEM220Q6QAJ8 160 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CRTC3Q6UUV7 619 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ZFP90Q8TF47 636 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PPWD1Q96BP3 646 aaKnown RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 RIPOR3Q96MK2 946 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 AIFM2Q9BRQ8 373 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 LHPPQ9H008 270 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 RSPH9Q9H1X1 276 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ANKHQ9HCJ1 492 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 SLC52A3Q9NQ40 469 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CCDC177Q9NQR7 707 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 AGPAT4Q9NRZ5 378 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ARL15Q9NXU5 204 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ADA2Q9NZK5 511 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 OPTCQ9UBM4 332 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 GPR45Q9Y5Y3 372 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ARHGEF33A8MVX0 844 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 LOC730098B7Z3J9 87 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 C1QTNF3-AMACRE9PGA6 284 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 TAF4O00268 1085 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 MATN4O95460 622 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 OTCP00480 354 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 KRT8P05787 483 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ANXA5P08758 320 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 NAGAP17050 411 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PDHA2P29803 388 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 NKX2-5P52952 324 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PLA2G16P53816 162 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 SEC13P55735 322 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 DPTQ07507 201 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 STX5Q13190 355 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 AQP6Q13520 282 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CAMK2GQ13555 558 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 ABRAXAS2Q15018 415 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CDK10Q15131 360 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 HIST2H2ACQ16777 129 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CCSMST1Q4G0I0 132 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CYBRD1Q53TN4 286 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 KIAA1211LQ6NV74 962 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 NEK5Q6P3R8 708 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 EPHX4Q8IUS5 362 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 OR2T34Q8NGX1 318 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 OR2T3Q8NH03 318 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 METTL6Q8TCB7 284 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 PHF10Q8WUB8 498 aaKnown RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 CENPNQ96H22 339 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-201ENST00000317677 TEX37Q96LM6 180 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 B3GNT4Q9C0J1 378 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 AIG1Q9NVV5 245 aa12.61□□□□□ -0.39
CPNE1-201ENST00000317677 TRPM6Q9BX84 2022 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 AQP12BA6NM10 295 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SLC16A5O15375 505 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 STK16O75716 305 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SEC24DO94855 1032 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 BMP4P12644 408 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CAPN3P20807 821 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GRK3P35626 688 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GPR1P46091 355 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SERPINB10P48595 397 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 VAC14Q08AM6 782 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SP140Q13342 867 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CST6Q15828 149 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CDKL4Q5MAI5 379 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SAMD4BQ5PRF9 694 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 RBM48Q5RL73 367 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 C6orf136Q5SQH8 315 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 TUBA3EQ6PEY2 450 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 HACD2Q6Y1H2 254 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ZBTB46Q86UZ6 589 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms