RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 DGKKQ5KSL6 1271 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ATRAIDQ6UW56 229 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 LAYNQ6UX15 382 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 NPNTQ6UXI9 565 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 CCDC149Q6ZUS6 474 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RAB11FIP2Q7L804 512 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RBM23Q86U06 439 aaKnown RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF567Q8N184 647 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 KRT78Q8N1N4 520 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ADAMTS19Q8TE59 1207 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RNF139Q8WU17 664 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SLC38A4Q969I6 547 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 P2RY11Q96G91 374 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 RBP7Q96R05 134 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 DUSP16Q9BY84 665 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ACE2Q9BYF1 805 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-201ENST00000316433 ZYG11BQ9C0D3 744 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 GABARAPL1Q9H0R8 117 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 FBXW11Q9UKB1 542 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 SHROOM3Q8TF72 1996 aa6.45□□□□□ -1.38
ZNF540-201ENST00000316433 FAM74A7A6NL05 159 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 E9PAM4 449 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HPGDSO60760 199 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PRKRAO75569 313 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CYP7B1O75881 506 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RBBP9O75884 186 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FADS2O95864 444 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CSF2P04141 144 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 APRTP07741 180 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ACTR1BP42025 376 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RAB10P61026 200 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PRPSAP1Q14558 356 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PPA1Q15181 289 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TEAD4Q15561 434 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM44Q2T9K0 475 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 AARDQ4LEZ3 155 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FAM74A3Q4VXF1 159 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 KLHL26Q53HC5 615 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SCARA5Q6ZMJ2 495 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RTL4Q6ZR62 310 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 USP53Q70EK8 1073 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 LARP4Q71RC2 724 aaKnown RBP eCLIP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 BHLHA9Q7RTU4 235 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SPATA19Q7Z5L4 167 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ASPGQ86U10 573 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SLC9B2Q86UD5 537 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PHYKPLQ8IUZ5 450 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CENPLQ8N0S6 344 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 OXR1Q8N573 874 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TEX26Q8N6G2 289 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CEP76Q8TAP6 659 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HMGCLL1Q8TB92 370 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 WNT8BQ93098 351 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 KCNA7Q96RP8 456 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TRIB3Q96RU7 358 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FEM1AQ9BSK4 669 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ALG2Q9H553 416 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PRMT8Q9NR22 394 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ASAH2Q9NR71 780 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 KCMF1Q9P0J7 381 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 EPHA6Q9UF33 1036 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 EGFL7Q9UHF1 273 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MUTYHQ9UIF7 546 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 HCN2Q9UL51 889 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 MGAT4AQ9UM21 535 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ING4Q9UNL4 249 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TCRBV5S2A0A599 114 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 WDR27A2RRH5 827 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FAM170BA6NMN3 283 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 A8MXK9 166 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ARNTLO00327 626 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TULP3O75386 442 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 USP2O75604 605 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ANXA9O76027 345 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RLN2P04090 185 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RB1P06400 928 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TFEBP19484 476 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CHRM3P20309 590 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ACADLP28330 430 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PXNP49023 591 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 NRLP54845 237 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ISL1P61371 349 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ERVK-25P63136 954 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SLC3A1Q07837 685 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ARHGAP1Q07960 439 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 COTL1Q14019 142 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 PON3Q15166 354 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TRIP4Q15650 581 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-201ENST00000316433 RFX4Q33E94 735 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF528Q3MIS6 628 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SV2CQ496J9 727 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SLC35F1Q5T1Q4 408 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 TSTD2Q5T7W7 516 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 VASNQ6EMK4 673 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 FAM92BQ6ZTR7 304 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 SSX9Q7RTT3 188 aa6.44□□□□□ -1.38
ZNF540-201ENST00000316433 LUZP2Q86TE4 346 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms