RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MRPS26Q9BYN8 205 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 SCN9AQ15858 1988 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 CLIC1O00299 241 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 ADAMDEC1O15204 470 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 MAFKO60675 156 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 SYNGR4O95473 234 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 LATS1O95835 1130 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 AGR2O95994 175 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 EPOP01588 193 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 PTNP21246 168 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 AGTR2P50052 363 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 AFF1P51825 1210 aaKnown RBP13.08□□□□□ -0.31
RFFL-201ENST00000315249 NFE2L1Q14494 772 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.31
RFFL-201ENST00000315249 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 DOK4Q8TEW6 326 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 GAL3ST1Q99999 423 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 IL1RAPQ9NPH3 570 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 PDLIM7Q9NR12 457 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 CYTH4Q9UIA0 394 aa13.08□□□□□ -0.31
RFFL-201ENST00000315249 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.31
RFFL-201ENST00000315249 MAP2K7O14733 419 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 CASKO14936 926 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 LILRB3O75022 631 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 CST5P28325 142 aaPredicted RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 OR4K14Q8NGD5 310 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 CIB1Q99828 191 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 IRGMA1A4Y4 181 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 HSD11B1P28845 292 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 MARCH8Q5T0T0 291 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 OR52E4Q8NGH9 312 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 PMM1Q92871 262 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 ZFRQ96KR1 1074 aaKnown RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 GRHL1Q9NZI5 618 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 POU2F3Q9UKI9 436 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 CLCN4P51793 760 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 CARTPTQ16568 116 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 OR2L5Q8NG80 312 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 MVB12BQ9H7P6 319 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
RFFL-201ENST00000315249 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 LRCH1Q9Y2L9 728 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
RFFL-201ENST00000315249 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 WASHC1A8K0Z3 465 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 GSC2O15499 205 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 DGKQP52824 942 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 WASH2PQ6VEQ5 465 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 SLAMF1Q13291 335 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 WDTC1Q8N5D0 677 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 NAXEQ8NCW5 288 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 C7orf26Q96N11 449 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 TBX5Q99593 518 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 DPH7Q9BTV6 452 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 DERL2Q9GZP9 239 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 TMEM59LQ9UK28 342 aa13.08□□□□□ -0.32
RFFL-201ENST00000315249 UGT2B11O75310 529 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 PRAMEF12O95522 483 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 CDK9P50750 372 aaKnown RBP13.07□□□□□ -0.32
RFFL-201ENST00000315249 DEFB110Q30KQ9 67 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
RFFL-201ENST00000315249 CLSTN3Q9BQT9 956 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 TPK1Q9H3S4 243 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 MOCS1Q9NZB8 636 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 BCKDKO14874 412 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 SPINT3P49223 89 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 DPY19L1Q2PZI1 675 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 SNRNP27Q8WVK2 155 aaKnown RBP13.07□□□□□ -0.32
RFFL-201ENST00000315249 MRGPRX2Q96LB1 330 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 COMMD4Q9H0A8 199 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 DLGAP4Q9Y2H0 992 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 PRODHO43272 600 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 OPN1SWP03999 348 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 SRCP12931 536 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 TAS2R9Q9NYW1 312 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 HSF2Q03933 536 aa13.07□□□□□ -0.32
RFFL-201ENST00000315249 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
RFFL-201ENST00000315249 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms