RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ADAMTS9Q9P2N4 1935 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 A0A1B0GTW7 788 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 NME4O00746 187 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 AMD1P17707 334 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 CLDN8P56748 225 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 RPE65Q16518 533 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 SLC15A3Q8IY34 581 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 C2orf73Q8N5S3 287 aaPredicted RBP23.97■■□□□ 1.43
CDPF1-201ENST00000314567 SLC5A11Q8WWX8 675 aa23.97■■□□□ 1.43
CDPF1-201ENST00000314567 JPH3Q8WXH2 748 aaPredicted RBP23.97■■□□□ 1.43
CDPF1-201ENST00000314567 A6NCN8 305 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 PATE3B3GLJ2 98 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 STAMBPO95630 424 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 C1GALT1C1LP0DN25 315 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 TCN1P20061 433 aaPredicted RBP23.96■■□□□ 1.43
CDPF1-201ENST00000314567 PRAMEF13Q5VWM6 474 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 DHDDSQ86SQ9 333 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 LMX1AQ8TE12 382 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 APIPQ96GX9 242 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 TACO1Q9BSH4 297 aaKnown RBP23.96■■□□□ 1.43
CDPF1-201ENST00000314567 PCDHA9Q9Y5H5 950 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 CABIN1Q9Y6J0 2220 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 BLKP51451 505 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 BNIP2Q12982 314 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 CAPRIN1Q14444 709 aaKnown RBP23.96■■□□□ 1.43
CDPF1-201ENST00000314567 RAB42Q8N4Z0 105 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 FAM156AQ8NDB6 213 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 OR7G3Q8NG95 312 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 SLC13A3Q8WWT9 602 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 GSDMCQ9BYG8 508 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 UCKL1Q9NWZ5 548 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 ZNF624Q9P2J8 865 aaPredicted RBP23.96■■□□□ 1.43
CDPF1-201ENST00000314567 DLGAP4Q9Y2H0 992 aa23.96■■□□□ 1.43
CDPF1-201ENST00000314567 GNSP15586 552 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 MSX2P35548 267 aaPredicted RBP23.95■■□□□ 1.42
CDPF1-201ENST00000314567 TSTA3Q13630 321 aaPredicted RBP23.95■■□□□ 1.42
CDPF1-201ENST00000314567 TEAD4Q15561 434 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 CYP2A13Q16696 494 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 HIST2H2ACQ16777 129 aaPredicted RBP23.95■■□□□ 1.42
CDPF1-201ENST00000314567 HIST2H2AA3Q6FI13 130 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 SLC2A7Q6PXP3 512 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 NXPE4Q6UWF7 544 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 ABRAXAS1Q6UWZ7 409 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 LAS2Q8IYD9 372 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 TMEM125Q96AQ2 219 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 PCBD2Q9H0N5 130 aa23.95■■□□□ 1.42
CDPF1-201ENST00000314567 RUVBL1Q9Y265 456 aaKnown RBP23.95■■□□□ 1.42
CDPF1-201ENST00000314567 GALR2O43603 387 aaPredicted RBP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 BAG2O95816 211 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 MTHFD1P11586 935 aaKnown RBP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 SDC1P18827 310 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 CNR2P34972 360 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 THEMIS2Q5TEJ8 643 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 SYT12Q8IV01 421 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 UBE2E3Q969T4 207 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 APOLD1Q96LR9 279 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 MUC13Q9H3R2 512 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 CMTM6Q9NX76 183 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 TSC22D4Q9Y3Q8 395 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 PCDHGA2Q9Y5H1 932 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 H3BNX3 289 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 PRMT3O60678 531 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 F3P13726 295 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 CTSKP43235 329 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 EEFSECP57772 596 aaKnown RBP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 PWP1Q13610 501 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 SLBPQ14493 270 aaKnown RBP eCLIP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 FAM174BQ3ZCQ3 159 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 NOXRED1Q6NXP6 359 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 ZNF548Q8NEK5 533 aaPredicted RBP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 FAM46DQ8NEK8 389 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 DNAJB8Q8NHS0 232 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 NRG4Q8WWG1 115 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 TESCQ96BS2 214 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 MTERF1Q99551 399 aaKnown RBP23.94■■□□□ 1.42
CDPF1-201ENST00000314567 SMOC1Q9H4F8 434 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 XKR8Q9H6D3 395 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 NMRK1Q9NWW6 199 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 PCOLCE2Q9UKZ9 415 aa23.94■■□□□ 1.42
CDPF1-201ENST00000314567 FOXE1O00358 373 aaPredicted RBP23.93■■□□□ 1.42
CDPF1-201ENST00000314567 MYO1DO94832 1006 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 KCNH1O95259 989 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 CFIP05156 583 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 PGRP06401 933 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 C8BP07358 591 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 PCNAP12004 261 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 SLC19A1P41440 591 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 DGKQP52824 942 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 BNIP3Q12983 259 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 DDX39BQ13838 428 aaKnown RBP23.93■■□□□ 1.42
CDPF1-201ENST00000314567 KRT33BQ14525 404 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 C6orf10Q5SRN2 563 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 CATSPEREQ5SY80 951 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 GPR179Q6PRD1 2367 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 HUS1BQ8NHY5 278 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 RSRC1Q96IZ7 334 aaKnown RBP23.93■■□□□ 1.42
CDPF1-201ENST00000314567 TRIM15Q9C019 465 aa23.93■■□□□ 1.42
CDPF1-201ENST00000314567 GEMIN8Q9NWZ8 242 aaKnown RBP23.93■■□□□ 1.42
CDPF1-201ENST00000314567 PIPSLA2A3N6 862 aa23.92■■□□□ 1.42
CDPF1-201ENST00000314567 PRR33A8MZF0 331 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms