RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ITGA2P17301 1181 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 HSD3B2P26439 372 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 AOAHP28039 575 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 SEPHS1P49903 392 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 WNT3P56703 355 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 KCNJ10P78508 379 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CLPPQ16740 277 aaPredicted RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ZDHHC20Q5W0Z9 365 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 PARP16Q8N5Y8 322 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 C11orf65Q8NCR3 313 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 LINC01599Q8WXQ3 324 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 GGHQ92820 318 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 EGLN2Q96KS0 407 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 KCNC2Q96PR1 638 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 DUSP26Q9BV47 211 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 KLF16Q9BXK1 252 aaPredicted RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 HOXD1Q9GZZ0 328 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CRNNQ9UBG3 495 aaPredicted RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 AFF4Q9UHB7 1163 aaKnown RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 CFL2Q9Y281 166 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 IGSF6O95976 241 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 B3GALT4O96024 378 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CKBP12277 381 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ALOX12P18054 663 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CST5P28325 142 aaPredicted RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 CA5AP35218 305 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 TGFBR1P36897 503 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 UGT2B15P54855 530 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ACSM2AQ08AH3 577 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CDH18Q13634 790 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 KCNC3Q14003 757 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CDKN3Q16667 212 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 HKDC1Q2TB90 917 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 PTCHD3Q3KNS1 767 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 PLEKHS1Q5SXH7 462 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ACSM2BQ68CK6 577 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 SYTL1Q8IYJ3 562 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
MKS1-201ENST00000313863 ASB11Q8WXH4 323 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 CDADC1Q9BWV3 514 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 ZNF556Q9HAH1 456 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 IMPAD1Q9NX62 359 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 POU2F3Q9UKI9 436 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 FZD4Q9ULV1 537 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 OR51B4Q9Y5P0 310 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 EFCAB10A6NFE3 127 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 MPZL2O60487 215 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 NBNO60934 754 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 KCNK2O95069 426 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
MKS1-201ENST00000313863 KRT8P05787 483 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
MKS1-201ENST00000313863 SERPINA4P29622 427 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 CSKP41240 450 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 CASP3P42574 277 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 CHIT1Q13231 466 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 ARMCX4Q5H9R4 360 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 RTP2Q5QGT7 225 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 C10orf62Q5T681 223 aaPredicted RBP13.37□□□□□ -0.27
MKS1-201ENST00000313863 CPTPQ5TA50 214 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 GALNT10Q86SR1 603 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 HEATR4Q86WZ0 1026 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 OR10G2Q8NGC3 310 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 LYSMD1Q96S90 227 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 FEVQ99581 238 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 EBPLQ9BY08 206 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
MKS1-201ENST00000313863 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
MKS1-201ENST00000313863 SH3D21A4FU49 640 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 FAM47E-STBD1D6RA91 191 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 DSCR3O14972 297 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SCAMP2O15127 329 aaKnown RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 AOC2O75106 756 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 VIPP01282 170 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 CCR7P32248 378 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 TIE1P35590 1138 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SLC19A1P41440 591 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ALDH9A1P49189 494 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SLC11A1P49279 550 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 RGS6P49758 472 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SELENOWP63302 87 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 IRF8Q02556 426 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms