RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MAP7Q14244 749 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 NCF4Q15080 339 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 AMER3Q8N944 861 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 SNRNP27Q8WVK2 155 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 SLC5A11Q8WWX8 675 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 PHF21BQ96EK2 531 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 CABS1Q96KC9 395 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 NSUN5Q96P11 429 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 PARD6BQ9BYG5 372 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TMEM216Q9P0N5 145 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 IFT80Q9P2H3 777 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 SNX7Q9UNH6 387 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 SGK494L7N484 410 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 MAP2K7O14733 419 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 KLHL2O95198 593 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 SERPINB8P50452 374 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 DCDP81605 110 aaKnown RBP11.46□□□□□ -0.57
SCFD1-201ENST00000311943 HYAL2Q12891 473 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 GRM7Q14831 915 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 RBBP5Q15291 538 aaKnown RBP11.46□□□□□ -0.57
SCFD1-201ENST00000311943 TECRLQ5HYJ1 363 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 FAAH2Q6GMR7 532 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 MRPL14Q6P1L8 145 aaKnown RBP11.46□□□□□ -0.57
SCFD1-201ENST00000311943 TLDC1Q6P9B6 456 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 SLCO4C1Q6ZQN7 724 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 VN1R5Q7Z5H4 357 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 ABHD11Q8NFV4 315 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 OR8K5Q8NH50 307 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 NLNQ9BYT8 704 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 GEMIN8Q9NWZ8 242 aaKnown RBP11.46□□□□□ -0.57
SCFD1-201ENST00000311943 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 TLK1Q9UKI8 766 aa11.46□□□□□ -0.57
SCFD1-201ENST00000311943 PTRH2Q9Y3E5 179 aaKnown RBP11.46□□□□□ -0.57
SCFD1-201ENST00000311943 FAM208BQ5VWN6 2430 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 A0A1B0GX78 115 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 PYCARD-AS1I3L0S3 204 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SRPX2O60687 465 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 KERAO60938 352 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 C1QL1O75973 258 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 EZRP15311 586 aaKnown RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 OTX2P32243 289 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 PIK3CGP48736 1102 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 RAB8AP61006 207 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ATP6V0D1P61421 351 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ABATP80404 500 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 NXPE4Q6UWF7 544 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SNX31Q8N9S9 440 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 PDPRQ8NCN5 879 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ADAMTS17Q8TE56 1095 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ANKRD7Q92527 254 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 TM4SF19Q96DZ7 209 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 MMABQ96EY8 250 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SPSB2Q99619 263 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 YIPF2Q9BWQ6 316 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 HCN3Q9P1Z3 774 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF490Q9ULM2 529 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 AP1M2Q9Y6Q5 423 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 TNRC6AQ8NDV7 1962 aaKnown RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ARGFXA6NJG6 315 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF839A8K0R7 811 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 DSCR3O14972 297 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 NDUFS4O43181 175 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 PDGFAP04085 211 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ABHD2P08910 425 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 PYGBP11216 843 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 CCR8P51685 355 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 CDKL1Q00532 357 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 DOC2AQ14183 400 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SLBPQ14493 270 aaKnown RBP eCLIP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 NKG7Q16617 165 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SLC13A3Q8WWT9 602 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ISL2Q96A47 359 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 C8orf44Q96CB5 159 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 SCYL1Q96KG9 808 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 CD244Q9BZW8 370 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 TSPYL1Q9H0U9 437 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 NMRAL1Q9HBL8 299 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 RRAGDQ9NQL2 400 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF71Q9NQZ8 489 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF180Q9UJW8 692 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
SCFD1-201ENST00000311943 A0A087X1B8 175 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 TLDC2A0PJX2 215 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 PABPN1LA6NDY0 278 aaKnown RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 STK16O75716 305 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 CDC123O75794 336 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms