RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MARCH9Q86YJ5 346 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 CSNK1A1LQ8N752 337 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 L3MBTL4Q8NA19 623 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 GATA6Q92908 595 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 TMEM237Q96Q45 408 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 C17orf62Q9BQA9 187 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 NDC1Q9BTX1 674 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 ULBP3Q9BZM4 244 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 KCNK9Q9NPC2 374 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 NKIRAS1Q9NYS0 192 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 ASB1Q9Y576 335 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 PCDHGA11Q9Y5H2 935 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 CEP295Q9C0D2 2601 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 H0YGG7 62 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 OR1F1O43749 312 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 SNUPNO95149 360 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 EPORP19235 508 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ETV4P43268 484 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 PKNOX1P55347 436 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 PCBP4P57723 403 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 VSX2P58304 361 aaPredicted RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 CLCQ05315 142 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 RGS1Q08116 209 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 GPS2Q13227 327 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 DOC2AQ14183 400 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 SLBPQ14493 270 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 DEFB110Q30KQ9 67 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 WASHC2DQ5SRD0 308 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 GRHL2Q6ISB3 625 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 RHBDD2Q6NTF9 364 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 PWWP2BQ6NUJ5 590 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 MED27Q6P2C8 311 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ASPGQ86U10 573 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ESX1Q8N693 406 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 FGF11Q92914 225 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF382Q96SR6 550 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 CTRCQ99895 268 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 NOL11Q9H8H0 719 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ACTR5Q9H9F9 607 aaPredicted RBP17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 APMAPQ9HDC9 416 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
SSSCA1-201ENST00000309328 ANKDD1BA6NHY2 528 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 H0YIV9 168 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 H3BMH7 237 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 STK17BO94768 372 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 KLK3P07288 261 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 CREB1P16220 341 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 ARL1P40616 181 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 BCL6P41182 706 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 CYP4F3Q08477 520 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 PCLAFQ15004 111 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 RBBP5Q15291 538 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 RBBP7Q16576 425 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 PRTGQ2VWP7 1150 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 LAS2Q8IYD9 372 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 SNIP1Q8TAD8 396 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 SLC13A3Q8WWT9 602 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 CNDP1Q96KN2 507 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 RHBGQ9H310 441 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
SSSCA1-201ENST00000309328 TMEM120BA0PK00 339 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 AGRPO00253 132 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF749O43361 778 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 CLEC3AO75596 197 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 EIF2S1P05198 315 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 BPGMP07738 259 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 SERPINA6P08185 405 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 CD63P08962 238 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 CCNYL3P0C7X3 344 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 LIPCP11150 499 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 PIM1P11309 404 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 VARSP26640 1264 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 PIK3CBP42338 1070 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 SERPINB4P48594 390 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 ATP1A2P50993 1020 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 NAGLUP54802 743 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF33BQ06732 778 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 GALNT1Q10472 559 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 FAM53BQ14153 422 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 UNC50Q53HI1 259 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 HSP90B2PQ58FF3 399 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 FRMPD2BQ6IN97 320 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 PRMT9Q6P2P2 845 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 FRMD7Q6ZUT3 714 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 C10orf107Q8IVU9 208 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 KIRREL3Q8IZU9 778 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 NT5CQ8TCD5 201 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 TM4SF19Q96DZ7 209 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms