RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PADI2Q9Y2J8 665 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ACACBO00763 2458 aa10.5□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 IGF2RP11717 2491 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KCNE1BA0A087WTH5 132 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 A0A1W2PPM1 405 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 URADA6NGE7 173 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STX16-NPEPL1H3BU86 382 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 COPEO14579 308 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STX16O14662 325 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NDUFS4O43181 175 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KLK8O60259 260 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CD63P08962 238 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MTHFD2P13995 350 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GSTM2P28161 218 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EEF1DP29692 281 aaKnown RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AHRP35869 848 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KCNC1P48547 511 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCT5P48643 541 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EMP3P54852 163 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 IRF8Q02556 426 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 LAPTM5Q13571 262 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PCBP2Q15366 365 aaKnown RBP eCLIP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HKDC1Q2TB90 917 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 COL28A1Q2UY09 1125 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PRTGQ2VWP7 1150 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCDC153Q494R4 210 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ARHGAP40Q5TG30 622 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 METTL2BQ6P1Q9 378 aaKnown RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PRMT9Q6P2P2 845 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FAM199XQ6PEV8 388 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C19orf48Q6RUI8 117 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CROCCP2Q86T23 111 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 METTL27Q8N6F8 245 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC38A9Q8NBW4 561 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TRPV3Q8NET8 790 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR4K1Q8NGD4 311 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC13A3Q8WWT9 602 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STARD8Q92502 1023 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCT6BQ92526 530 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MVB12AQ96EY5 273 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PTCD3Q96EY7 689 aaKnown RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GBP5Q96PP8 586 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RUFY1Q96T51 708 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EFCAB11Q9BUY7 163 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SARGQ9BW04 601 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PITHD1Q9GZP4 211 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DRC3Q9H069 523 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EHD1Q9H4M9 534 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CPNE5Q9HCH3 593 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MID2Q9UJV3 735 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CDC14AQ9UNH5 594 aa10.49□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SCN2AQ99250 2005 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ANKDD1BA6NHY2 528 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 K7ENP7 123 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 P2RX6O15547 441 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 EFSO43281 561 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STATHP02808 62 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RAB40ALP0C0E4 278 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KRT4P19013 534 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FBLP22087 321 aaKnown RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 VARSP26640 1264 aaKnown RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PTPN4P29074 926 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HPDP32754 393 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SCTRP47872 440 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AVPR1BP47901 424 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SKP1P63208 163 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CYP4F2P78329 520 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PHEXP78562 749 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CHIT1Q13231 466 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SRSF6Q13247 344 aaKnown RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 COL9A2Q14055 689 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC9A5Q14940 896 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NCF4Q15080 339 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NKAIN1Q4KMZ8 207 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZNF385CQ66K41 422 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 INO80CQ6PI98 192 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FAM198BQ6UWH4 519 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TMIGD1Q6UXZ0 262 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLCO4C1Q6ZQN7 724 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MYLK4Q86YV6 388 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC22A9Q8IVM8 553 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SRRM1Q8IYB3 904 aaKnown RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CYP4X1Q8N118 509 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C4orf33Q8N1A6 199 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ENDOVQ8N8Q3 282 aaKnown RBP10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZCCHC10Q8TBK6 192 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PPP4R1Q8TF05 950 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 UBE2E3Q969T4 207 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ATP6V1E2Q96A05 226 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 COL26A1Q96A83 441 aa10.48□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FKBP10Q96AY3 582 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms