RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ERN1O75460 977 aaKnown RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 EFEMP2O95967 443 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 APODP05090 189 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 TSPAN19P0C672 248 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 CD68P34810 354 aaPredicted RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 PIGAP37287 484 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 FOXM1Q08050 763 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 ZNF783Q6ZMS7 281 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 Q6ZVU0 165 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 USP51Q70EK9 711 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 TTC29Q8NA56 475 aaPredicted RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 OR10Q1Q8NGQ4 319 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 OR5K1Q8NHB7 308 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 FKBP10Q96AY3 582 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 KRT84Q9NSB2 600 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 HMX3A6NHT5 357 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 H3BUI4 141 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 AP3D1O14617 1153 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 SLITRK5O94991 958 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 SIX3O95343 332 aaPredicted RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 AKT1P31749 480 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 AP1S1P61966 158 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 ELP6Q0PNE2 266 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 EIF2B5Q13144 721 aaKnown RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 CTU2Q2VPK5 515 aaKnown RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
LSM3-201ENST00000306024 GARNL3Q5VVW2 1013 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 MRNIPQ6NTE8 343 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 LUZP2Q86TE4 346 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 FUNDC1Q8IVP5 155 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 OR10A6Q8NH74 314 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 TMEM125Q96AQ2 219 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 MYO19Q96H55 970 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 NARFLQ9H6Q4 476 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 BPIFA1Q9NP55 256 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 CRYL1Q9Y2S2 319 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 KCNE2Q9Y6J6 123 aa10.57□□□□□ -0.72
LSM3-201ENST00000306024 ARPC4-TTLL3A0A0A6YYG9 625 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 FADS2P1A8MWK0 482 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 CCL22O00626 93 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 HPRP00739 348 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 GPX3P22352 226 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 HOXD9P28356 352 aaPredicted RBP10.56□□□□□ -0.72
LSM3-201ENST00000306024 ESCO2Q56NI9 601 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 TANGO2Q6ICL3 276 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 ZNF767PQ75MW2 155 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 KCNA7Q96RP8 456 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 RNF112Q9ULX5 631 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 ZCWPW2A0A1B0GU75 182 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 VPS4BO75351 444 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
LSM3-201ENST00000306024 ATP4BP51164 291 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 POLR2LP62875 67 aaKnown RBP10.56□□□□□ -0.72
LSM3-201ENST00000306024 ZNF284Q2VY69 593 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 GPAT3Q53EU6 434 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 MPP7Q5T2T1 576 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 ANKS6Q68DC2 871 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 PKN3Q6P5Z2 889 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 MTSS1LQ765P7 747 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 UBQLNLQ8IYU4 475 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 GALNT11Q8NCW6 608 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 WFIKKN2Q8TEU8 576 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 AKAP1Q92667 903 aaKnown RBP eCLIP10.56□□□□□ -0.72
LSM3-201ENST00000306024 ASB2Q96Q27 587 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 OPTCQ9UBM4 332 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 CD207Q9UJ71 328 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 SHROOM3Q8TF72 1996 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 A8MUA0 341 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 MITFO75030 526 aaPredicted RBP10.56□□□□□ -0.72
LSM3-201ENST00000306024 GLP2RO95838 553 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 IFNA16P05015 189 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 EPHX1P07099 455 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 ALDOCP09972 364 aaKnown RBP10.56□□□□□ -0.72
LSM3-201ENST00000306024 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 TCF3P15923 654 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 ITGA2P17301 1181 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 GKP32189 559 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 UFM1P61960 85 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 IRAK1BP1Q5VVH5 260 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 FBXO39Q8N4B4 442 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 AADATQ8N5Z0 425 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 DCBLD1Q8N8Z6 715 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 IL17RDQ8NFM7 739 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 OR2AP1Q8NGE2 309 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 C3orf30Q96M34 536 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 CRLS1Q9UJA2 301 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 NUP50Q9UKX7 468 aa10.56□□□□□ -0.72
LSM3-201ENST00000306024 GOLGA4Q13439 2230 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 POP4O95707 220 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 FOSL2P15408 326 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 DDOSTP39656 456 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SLC1A2P43004 574 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ABATP80404 500 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms