RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 OOSP2Q86WS3 158 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 OXR1Q8N573 874 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 ZFP90Q8TF47 636 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 FCRL4Q96PJ5 515 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 INPP5KQ9BT40 448 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 RIOK2Q9BVS4 552 aaKnown RBP12.88□□□□□ -0.35
DDX54-201ENST00000306014 ANKRA2Q9H9E1 313 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 TIGARQ9NQ88 270 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 DNAJC27Q9NZQ0 273 aa12.88□□□□□ -0.35
DDX54-201ENST00000306014 BRWD3Q6RI45 1802 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 GSRP00390 522 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CBSLP0DN79 551 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 MYL9P24844 172 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CBSP35520 551 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 HNF1BP35680 557 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 MAGEA8P43361 318 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CLDN8P56748 225 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 RAB25P57735 213 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 Q6ZVU0 165 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DCP2Q8IU60 420 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 NCSTNQ92542 709 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 HEPHQ9BQS7 1158 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 A0A1B0GW55 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 WBP4O75554 376 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 C6orf47O95873 294 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CD1EP15812 388 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CSTF2P33240 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDX54-201ENST00000306014 HMGCLP35914 325 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 POLR2IP36954 125 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 DSTNP60981 165 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 RPS13P62277 151 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 CD83Q01151 205 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 HEPACAMQ14CZ8 416 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 AUTS2Q8WXX7 1259 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 KLHL6Q8WZ60 621 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 C11orf24Q96F05 449 aaPredicted RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 ALPK1Q96QP1 1244 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 BARD1Q99728 777 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 DSN1Q9H410 356 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 LOC285095A0A1B0GVY8 99 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 PGRMC2O15173 223 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 PSKH1P11801 424 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 HPGDP15428 266 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 DCKP27707 260 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CRB2Q5IJ48 1285 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 OTUD1Q5VV17 481 aaPredicted RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 ARMC6Q6NXE6 501 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 TRNT1Q96Q11 434 aaKnown RBP12.87□□□□□ -0.35
DDX54-201ENST00000306014 FERD3LQ96RJ6 166 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 EHD1Q9H4M9 534 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 RNF186Q9NXI6 227 aa12.87□□□□□ -0.35
DDX54-201ENST00000306014 BCHEP06276 602 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 PREPP48147 710 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SPCS2Q15005 226 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SPIN4Q56A73 249 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CST9Q5W186 159 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SDE2Q6IQ49 451 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CCBE1Q6UXH8 406 aaPredicted RBP12.86□□□□□ -0.35
DDX54-201ENST00000306014 CLECL1Q8IZS7 167 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 TBC1D15Q8TC07 691 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 FEVQ99581 238 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 DHFRP00374 187 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 ATXN1LP0C7T5 689 aaKnown RBP12.86□□□□□ -0.35
DDX54-201ENST00000306014 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SCAMP4Q969E2 229 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 MAGIXQ9H6Y5 334 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 TNFRSF12AQ9NP84 129 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 ENPP5Q9UJA9 477 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 LOXHD1Q8IVV2 1947 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CDRT1O95170 752 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CSF2P04141 144 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 ALPLP05186 524 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms