RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TXNL4AP83876 142 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 DMPKQ09013 629 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CYP2A13Q16696 494 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SPIN4Q56A73 249 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 THEMIS2Q5TEJ8 643 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRAMEF13Q5VWM6 474 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 LCTLQ6UWM7 567 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MTSS1LQ765P7 747 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CARM1Q86X55 608 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 LINC01555Q8NAE3 123 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SMRP1Q8NCR6 262 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 OR52E4Q8NGH9 312 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GANCQ8TET4 914 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 COQ8BQ96D53 544 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GBP5Q96PP8 586 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 OSBPL11Q9BXB4 747 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SLC17A9Q9BYT1 436 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 BTBD1Q9H0C5 482 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 Q9H521 79 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SIRT5Q9NXA8 310 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 COL4A2P08572 1712 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 FAM220BPB1ANY3 271 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PCDH7O60245 1069 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 RNGTTO60942 597 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 COQ9O75208 318 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 FCGR1AP12314 374 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PSMB5P28074 263 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MTHFRP42898 656 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 TRPC1P48995 793 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PPP2CBP62714 309 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PPP2CAP67775 309 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SGCGQ13326 291 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 C16orf72Q14CZ0 275 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRSS53Q2L4Q9 553 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ZNF385BQ569K4 471 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PAGE2BQ5JRK9 111 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CAMKMTQ7Z624 323 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MFSD2AQ8NA29 543 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 FBXO30Q8TB52 745 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 TFAP2CQ92754 450 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 NELL1Q92832 810 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 REPS1Q96D71 796 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 DCAF13Q9NV06 445 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 CUEDC1Q9NWM3 386 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 FAM120CQ9NX05 1096 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 PDP2Q9P2J9 529 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 TAC3Q9UHF0 121 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SLC17A4Q9Y2C5 497 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GNG14A0A1W2PPG7 69 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GPR89AB7ZAQ6 455 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CLIC1O00299 241 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GSTA4O15217 222 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 KIF1CO43896 1103 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 CREG1O75629 220 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRKD3O94806 890 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MYO1DO94832 1006 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SCELO95171 688 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 KCNK5O95279 499 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 RASAL1O95294 804 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CPSF4O95639 269 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 LDLRP01130 860 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GNAO1P09471 354 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 GPR89BP0CG08 455 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 RAP2AP10114 183 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 HOXB2P14652 356 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ENGP17813 658 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MC1RQ01726 317 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ARHGAP19Q14CB8 494 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CLCA4Q14CN2 919 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ADRM1Q16186 407 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MPEG1Q2M385 716 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 TMIGD1Q6UXZ0 262 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 CLEC4FQ8N1N0 589 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PACRGLQ8N7B6 248 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 FAM120BQ96EK7 910 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 REXO5Q96IC2 774 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 MYOCQ99972 504 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 DUSP26Q9BV47 211 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 SORBS1Q9BX66 1292 aaKnown RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 PHPT1Q9NRX4 125 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 LIMD1Q9UGP4 676 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 ZNF232Q9UNY5 417 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 KCNK6Q9Y257 313 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 TSC22D4Q9Y3Q8 395 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 MAGED1Q9Y5V3 778 aaPredicted RBP6.29□□□□□ -1.4
USP47-201ENST00000305481 USP34Q70CQ2 3546 aa6.29□□□□□ -1.4
USP47-201ENST00000305481 PRAMEF33A0A0G2JMD5 474 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C1orf226A1L170 272 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 EI24O14681 340 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SCAMP1O15126 338 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 CLOCKO15516 846 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 DNTTP04053 509 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 RETP07949 1114 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SLC35G4P0C7Q5 338 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms