RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PCDHGB1Q9Y5G3 927 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 A0A0D9SEW6 157 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 FADS2P1A8MWK0 482 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 HAS3O00219 553 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MRPS14O60783 128 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 BMP1P13497 986 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TNNI3P19429 210 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CACNG1Q06432 222 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 HNRNPA0Q13151 305 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SERINC3Q13530 473 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CTXN3Q4LDR2 81 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ARMC12Q5T9G4 340 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CAPN13Q6MZZ7 669 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CCM2Q9BSQ5 444 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TMEM248Q9NWD8 314 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SLC25A37Q9NYZ2 338 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MEN1O00255 615 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PRSS23O95084 383 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 GADD45GO95257 159 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ADORA3P0DMS8 318 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 NR2F6P10588 404 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TYMPP19971 482 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 SSTR4P31391 388 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.392e-11■■■■□ 24.1
TRIM35-201ENST00000305364 NFE2L1Q14494 772 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PRSS36Q5K4E3 855 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CCDC149Q6ZUS6 474 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF367Q7RTV3 350 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ARRDC2Q8TBH0 407 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 SH3KBP1Q96B97 665 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PRDM5Q9NQX1 630 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 DNAJC27Q9NZQ0 273 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF225Q9UK10 706 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 SLC13A4Q9UKG4 626 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 AHDC1Q5TGY3 1603 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PRR23AA6NEV1 266 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TRIM64BA6NI03 449 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ORC5O43913 435 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 GPR32O75388 356 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TAF10Q12962 218 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 SLAMF1Q13291 335 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 XKR6Q5GH73 641 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TIGD4Q8IY51 512 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 OR6F1Q8NGZ6 308 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CSGALNACT1Q8TDX6 532 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 MED30Q96HR3 178 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CD244Q9BZW8 370 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 MKRN2Q9H000 416 aaKnown RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TMLHEQ9NVH6 421 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 MIOSQ9NXC5 875 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 MAU2Q9Y6X3 613 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 DDX5P17844 614 aaKnown RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CYP2A7P20853 494 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ENDOUP21128 410 aaKnown RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 TACR2P21452 398 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 CSRP3P50461 194 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 HK3P52790 923 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 SRSF11Q05519 484 aaKnown RBP12.63□□□□□ -0.39
TRIM35-201ENST00000305364 LIPKQ5VXJ0 399 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 MAL2Q969L2 176 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 EGLN2Q96KS0 407 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 RHCGQ9UBD6 479 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 ADAM30Q9UKF2 790 aa12.63□□□□□ -0.39
TRIM35-201ENST00000305364 PRPS1L1P21108 318 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 ZXDBP98169 803 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SNAPC1Q16533 368 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 KRT74Q7RTS7 529 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 DENND1CQ8IV53 801 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 CACTIN-AS1Q8N1I8 211 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 DUSP26Q9BV47 211 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 DHRS7Q9Y394 339 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SPIN1Q9Y657 262 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-201ENST00000305364 LOC285095A0A1B0GVY8 99 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 AXIN1O15169 862 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SOX14O95416 240 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 PDYNP01213 254 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 EBLN1P0CF75 366 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 SDC2P34741 201 aa12.62□□□□□ -0.39
TRIM35-201ENST00000305364 COX10Q12887 443 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms