RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MASP1P48740 699 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SLC10A7Q0GE19 358 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ANKDD1AQ495B1 522 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ZSWIM9Q86XI8 627 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 KIF18BQ86Y91 864 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 OR2L2Q8NH16 312 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SPATA22Q8NHS9 363 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 PCDHAC1Q9H158 963 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 OR51V1Q9H2C8 321 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 COL20A1Q9P218 1284 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 DEC1Q9P2X7 70 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FKBPLQ9UIM3 349 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ARL5AQ9Y689 179 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SH3D21A4FU49 640 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 MANBAO00462 879 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 DLDP09622 509 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CYBRD1Q53TN4 286 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TRMT10BQ6PF06 316 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 GALNT6Q8NCL4 622 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 BIRC7Q96CA5 298 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FGFBP2Q9BYJ0 223 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FOLH1BQ9HBA9 442 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SMURF1Q9HCE7 757 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TAS2R10Q9NYW0 307 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 A0A096LPI6 279 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TRBC2A0A5B9 178 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CPSF4LA6NMK7 179 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CLCA1A8K7I4 914 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 NT5C1B-RDH14C9J2C7 533 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF182P17025 639 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RABL3Q5HYI8 236 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CCSAPQ6IQ19 270 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF767PQ75MW2 155 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 C7orf43Q8WVR3 580 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RIPOR3Q96MK2 946 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 GLS2Q9UI32 602 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ARL5CA6NH57 179 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RGS9O75916 674 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 MT-CYBP00156 380 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ERCC1P07992 297 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ENDOUP21128 410 aaKnown RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 OR1D2P34982 312 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 DSC3Q14574 896 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 LRIF1Q5T3J3 769 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CACUL1Q86Y37 369 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ANKRD13BQ86YJ7 626 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FAM53CQ9NYF3 392 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 HCN2Q9UL51 889 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 PCDHB3Q9Y5E6 796 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 HTR1AP08908 422 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 RORAP35398 523 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 ARSFP54793 590 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 DUSP4Q13115 394 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 DNASE1L3Q13609 305 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 TNFAIP8L2Q6P589 184 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-201ENST00000302516 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 FAM129CQ86XR2 697 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 NPAS3Q8IXF0 933 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 OR52E4Q8NGH9 312 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 OR2L8Q8NGY9 312 aa7.43□□□□□ -1.22
SF3B3-201ENST00000302516 GABRR2P28476 465 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 S100A10P60903 97 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 RAB5BP61020 215 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PUM1Q14671 1186 aaKnown RBP eCLIP7.42□□□□□ -1.222e-6■■■■□ 20.9
SF3B3-201ENST00000302516 PAFAH1B3Q15102 231 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TFAP2BQ92481 460 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SLC39A1Q9NY26 324 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MALT1Q9UDY8 824 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 STUB1Q9UNE7 303 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MRPL42Q9Y6G3 142 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NWD2Q9ULI1 1742 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 VNN2O95498 520 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 EBLN1P0CF75 366 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SRCP12931 536 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 HSD3B1P14060 373 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MYF6P23409 242 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 HSD3B2P26439 372 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CD47Q08722 323 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ILF3Q12906 894 aaKnown RBP eCLIP7.42□□□□□ -1.222e-7■■■□□ 15.2
SF3B3-201ENST00000302516 MAD2L1BPQ15013 274 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TGFBIQ15582 683 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PRAMEF14Q5SWL7 426 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PRAMEF13Q5VWM6 474 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SLC22A10Q63ZE4 541 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NCBP2-AS2Q69YL0 99 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 KIAA1161Q6NSJ0 714 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CXCL17Q6UXB2 119 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GPAT4Q86UL3 456 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 BBS10Q8TAM1 723 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SETD6Q8TBK2 473 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 OR52B2Q96RD2 323 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PIP5K1AQ99755 562 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MS4A12Q9NXJ0 267 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms