RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PLA2G16P53816 162 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 SYT12Q8IV01 421 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 ZNF547Q8IVP9 402 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 GLB1L3Q8NCI6 653 aaPredicted RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 OR8J3Q8NGG0 315 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 ITPKCQ96DU7 683 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 CMTM7Q96FZ5 175 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 LRIG1Q96JA1 1093 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 ALPK1Q96QP1 1244 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 MAGEL2Q9UJ55 1249 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 BTBD3Q9Y2F9 522 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 YBX2Q9Y2T7 364 aaKnown RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 CFAP20Q9Y6A4 193 aaKnown RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 ADARB1P78563 741 aaKnown RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 BROXQ5VW32 411 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 USP51Q70EK9 711 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 ZNF551Q7Z340 670 aaPredicted RBP21.17■□□□□ 0.98
TPM4-201ENST00000300933 TMPRSS11BQ86T26 416 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 RAB2BQ8WUD1 216 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 IL17FQ96PD4 163 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 VPS35Q96QK1 796 aa21.17■□□□□ 0.98
TPM4-201ENST00000300933 YY2O15391 372 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 TCF3P15923 654 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 FSHRP23945 695 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 GGTA1PQ4G0N0 100 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 RTL10Q7L3V2 364 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 TBC1D21Q8IYX1 336 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 CLECL1Q8IZS7 167 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 CADM3Q8N126 398 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 ZNF480Q8WV37 535 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 FAM83CQ9BQN1 747 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 NTN4Q9HB63 628 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 HCN2Q9UL51 889 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 RWDD3Q9Y3V2 267 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 ELOVL7A1L3X0 281 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 AXIN1O15169 862 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 AQP9O43315 295 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 GMNNO75496 209 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 PRKD3O94806 890 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 NFATC1O95644 943 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 ZNF8P17098 575 aaPredicted RBP21.16■□□□□ 0.98
TPM4-201ENST00000300933 RPS3AP61247 264 aaKnown RBP21.16■□□□□ 0.98
TPM4-201ENST00000300933 AQP6Q13520 282 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 DNASE1L3Q13609 305 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 IER5LQ5T953 404 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 WFIKKN2Q8TEU8 576 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 FAM162AQ96A26 154 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 CHFRQ96EP1 664 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 NRBF2Q96F24 287 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 CCDC138Q96M89 665 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 REXO4Q9GZR2 422 aaKnown RBP21.16■□□□□ 0.98
TPM4-201ENST00000300933 TM7SF3Q9NS93 570 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 VPS29Q9UBQ0 182 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 TRPM6Q9BX84 2022 aa21.16■□□□□ 0.98
TPM4-201ENST00000300933 CPSF4O95639 269 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 FCGR1AP12314 374 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 CASP9P55211 416 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 R3HCC1LQ7Z5L2 792 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 WDR20Q8TBZ3 569 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 SH3YL1Q96HL8 342 aaPredicted RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 ACAT2Q9BWD1 397 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 PLA2G2FQ9BZM2 168 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 KAT8Q9H7Z6 458 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 TMEM45AQ9NWC5 275 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 TMED5Q9Y3A6 229 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 H0Y858 1186 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 RFXANKO14593 260 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 POP7O75817 140 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 C1orf105O95561 183 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 ITGB7P26010 798 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 HPCAL1P37235 193 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 ELAVL3Q14576 367 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 OXA1LQ15070 435 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 FXNQ16595 210 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 FAM83HQ6ZRV2 1179 aaPredicted RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 NEK10Q6ZWH5 1172 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 RIMKLAQ8IXN7 391 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 C1orf52Q8N6N3 182 aaKnown RBP21.15■□□□□ 0.98
TPM4-201ENST00000300933 GLMNQ92990 594 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 MUC13Q9H3R2 512 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 B3GNT3Q9Y2A9 372 aa21.15■□□□□ 0.98
TPM4-201ENST00000300933 EDDM13A0A1B0GTR0 161 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 PRR23AA6NEV1 266 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 CXCR6O00574 342 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 C7P10643 843 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 CNTN1Q12860 1018 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 UGT8Q16880 541 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 SPATS1Q496A3 300 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 RASGRP3Q8IV61 690 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 CHCHD4Q8N4Q1 142 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 HUS1BQ8NHY5 278 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 KLK6Q92876 244 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 FAM120BQ96EK7 910 aaKnown RBP21.14■□□□□ 0.98
TPM4-201ENST00000300933 FOPNLQ96NB1 174 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 FUNDC2Q9BWH2 189 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 DYRK4Q9NR20 520 aa21.14■□□□□ 0.98
TPM4-201ENST00000300933 GRXCR2A6NFK2 248 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 CLDN25C9JDP6 229 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 LILRB5O75023 590 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms