RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 J3KTA2 159 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 TNFRSF10BO14763 440 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ARHGEF9O43307 516 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 AKR7A2O43488 359 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 GPX5O75715 221 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 RPS19P39019 145 aaKnown RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 RFX2P48378 723 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 EIF4EBP2Q13542 120 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 PTCHD4Q6ZW05 846 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 DEFB132Q7Z7B7 95 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ZZZ3Q8IYH5 903 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 C1orf74Q96LT6 269 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 MTERF1Q99551 399 aaKnown RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ABHD16BQ9H3Z7 469 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 SH3BP4Q9P0V3 963 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ZFP37Q9Y6Q3 630 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ZNF236Q9UL36 1845 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 FAM25AB3EWG3 89 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 FAM25CB3EWG5 89 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 FAM25GB3EWG6 89 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 FAM227AF5H4B4 570 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 AP2A2O94973 939 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 KCNK5O95279 499 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CLDN9O95484 217 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 F2P00734 622 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 IL7P13232 177 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TACR2P21452 398 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TIE1P35590 1138 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 NFE2L1Q14494 772 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TRIM63Q969Q1 353 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 DIRAS2Q96HU8 199 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 NMRK2Q9NPI5 230 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 ERVW-1Q9UQF0 538 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 WASH4PA8MWX3 477 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 ANKRD66B4E2M5 251 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 FZD9O00144 591 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CAPN5O15484 640 aaPredicted RBP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 APOL3O95236 402 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 PRLP01236 227 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 EPOP01588 193 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TSPAN19P0C672 248 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CD52P31358 61 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 GGT2P36268 569 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 PTGER3P43115 390 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 GZMMP51124 257 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 HSPA14Q0VDF9 509 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 EXOC3L2Q2M3D2 409 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 GPR156Q8NFN8 814 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CHAC2Q8WUX2 184 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 HRASLS5Q96KN8 279 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 MAT2BQ9NZL9 334 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 DNAJC27Q9NZQ0 273 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CCDC59Q9P031 241 aaKnown RBP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TRBV5-3A0A0A0MS03 114 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 SOX14O95416 240 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CBLP22681 906 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 MYL9P24844 172 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 MAGEA2P43356 314 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 GPR50Q13585 617 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 PRR23CQ6ZRP0 262 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 CCDC190Q86UF4 302 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 NPLOC4Q8TAT6 608 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 SLC39A13Q96H72 371 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TRIB3Q96RU7 358 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 FZD4Q9ULV1 537 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 SPEF1Q9Y4P9 236 aa14.18□□□□□ -0.14
COL6A2-201ENST00000300527 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 TRIP12Q14669 1992 aaPredicted RBP14.18□□□□□ -0.14
COL6A2-201ENST00000300527 ENDOUP21128 410 aaKnown RBP14.17□□□□□ -0.14
COL6A2-201ENST00000300527 GKP32189 559 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 P2RX3P56373 397 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 CLDN8P56748 225 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 LRRC74AQ0VAA2 488 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 BCDIN3DQ7Z5W3 292 aaKnown RBP14.17□□□□□ -0.14
COL6A2-201ENST00000300527 ADGRG2Q8IZP9 1017 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 TAGAPQ8N103 731 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 OR9Q1Q8NGQ5 310 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 CLEC2DQ9UHP7 191 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 MBLAC1A4D2B0 266 aaPredicted RBP14.17□□□□□ -0.14
COL6A2-201ENST00000300527 SCO1O75880 301 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 RHOCP08134 193 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 ZNF7P17097 686 aaPredicted RBP14.17□□□□□ -0.14
COL6A2-201ENST00000300527 OR1G1P47890 313 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 BTBD16Q32M84 506 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 GPAT3Q53EU6 434 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 DGKKQ5KSL6 1271 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 KATNBL1Q9H079 304 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 TPT1P8Q9HAU6 139 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 ZNF226Q9NYT6 803 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 PCDHGB3Q9Y5G1 929 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 AOC2O75106 756 aa14.17□□□□□ -0.14
COL6A2-201ENST00000300527 CDRT1O95170 752 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms