RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 OR6C1Q96RD1 312 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 CPNE7Q9UBL6 633 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 LNPEPQ9UIQ6 1025 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 IKZF3Q9UKT9 509 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PRKAB1Q9Y478 270 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PCDHGA6Q9Y5G7 932 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 ITM2AO43736 263 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 DNAJB5O75953 348 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 RPN2P04844 631 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 RPS17P08708 135 aaKnown RBP20.23■□□□□ 0.83
SMCO4-201ENST00000298966 F3P13726 295 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 PIK3CGP48736 1102 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 SEPHS1P49903 392 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 GFERP55789 205 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 DMTNQ08495 405 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 CRTC3Q6UUV7 619 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 MAMDC2Q7Z304 686 aaPredicted RBP20.23■□□□□ 0.83
SMCO4-201ENST00000298966 CCNYL1Q8N7R7 359 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 NAT14Q8WUY8 206 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 STON2Q8WXE9 905 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 ATL1Q8WXF7 558 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 PHF21BQ96EK2 531 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 SORT1Q99523 831 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 C20orf27Q9GZN8 174 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 NPHS2Q9NP85 383 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 PADI1Q9ULC6 663 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 USH1CQ9Y6N9 552 aa20.23■□□□□ 0.83
SMCO4-201ENST00000298966 CELSR2Q9HCU4 2923 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 A6NCN8 305 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 SUPT7LO94864 414 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 MLYCDO95822 493 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 C9P02748 559 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 ACP5P13686 325 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 CLCNKAP51800 687 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 NADK2Q4G0N4 442 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 METRNLQ641Q3 311 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 SPNS2Q8IVW8 549 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 TGM7Q96PF1 710 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 SLC25A23Q9BV35 468 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 VTI1BQ9UEU0 232 aa20.22■□□□□ 0.83
SMCO4-201ENST00000298966 PTBP2Q9UKA9 531 aaKnown RBP20.22■□□□□ 0.83
SMCO4-201ENST00000298966 PCYT1BQ9Y5K3 369 aaPredicted RBP20.22■□□□□ 0.83
SMCO4-201ENST00000298966 ANKRD17O75179 2603 aaKnown RBP20.22■□□□□ 0.83
SMCO4-201ENST00000298966 CRYBG3Q68DQ2 2970 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 TOX3O15405 576 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 LYPLA1O75608 230 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 PBLDP30039 288 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 GGT5P36269 586 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 SH3BP2P78314 561 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 UNC50Q53HI1 259 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 ARL13AQ5H913 290 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 VRK3Q8IV63 474 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 PHC3Q8NDX5 983 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 CT55Q8WUE5 264 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 EGFL8Q99944 293 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 SLC29A3Q9BZD2 475 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 GSTO2Q9H4Y5 243 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 ZNF768Q9H5H4 540 aaKnown RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 ZNF395Q9H8N7 513 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-201ENST00000298966 ARL15Q9NXU5 204 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 ADAMTS6Q9UKP5 1117 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 PDE10AQ9Y233 779 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 DNAJC16Q9Y2G8 782 aa20.21■□□□□ 0.83
SMCO4-201ENST00000298966 C21orf140B9A014 251 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 IFRD1O00458 451 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 RASSF9O75901 435 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 SORBS2O94875 1100 aaKnown RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 FGF5P12034 268 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 ALOX15P16050 662 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 TYRP1P17643 537 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 AMD1P17707 334 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 COL8A1P27658 744 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 EEF1DP29692 281 aaKnown RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 ARRB2P32121 409 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 DCTP40126 519 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 LCP2Q13094 533 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 PHKG1Q16816 387 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 EIF2S3LQ2VIR3 472 aaKnown RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 CYB5D1Q6P9G0 228 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 RFWD2Q8NHY2 731 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 THAP4Q8WY91 577 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 RHBDF1Q96CC6 855 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 CCDC138Q96M89 665 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 OR52A5Q9H2C5 316 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 UCK1Q9HA47 277 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 LHX9Q9NQ69 397 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 WWOXQ9NZC7 414 aa20.2■□□□□ 0.82
SMCO4-201ENST00000298966 PCDHGA9Q9Y5G4 932 aaKnown RBP20.2■□□□□ 0.82
SMCO4-201ENST00000298966 UBXN7O94888 489 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 PREPP48147 710 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 RPL14P50914 215 aaKnown RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 UBE2IP63279 158 aaKnown RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 NFE2L1Q14494 772 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 INPP5JQ15735 1006 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 YTHDF3Q7Z739 585 aaKnown RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 PPP1R3BQ86XI6 285 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 ZNF483Q8TF39 744 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 DLG3Q92796 817 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 FBXL8Q96CD0 374 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms