RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SBSNQ6UWP8 590 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TTC29Q8NA56 475 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 STARD8Q92502 1023 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PYCR2Q96C36 320 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 DTNBP1Q96EV8 351 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ZFYVE21Q9BQ24 234 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 DERL2Q9GZP9 239 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ACSS3Q9H6R3 686 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 TMEM184CQ9NVA4 438 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 CUEDC1Q9NWM3 386 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 ANKMY1Q9P2S6 941 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 DHCR7Q9UBM7 475 aaKnown RBP11.57□□□□□ -0.56
HMGB2-201ENST00000296503 IKBKGQ9Y6K9 419 aa11.57□□□□□ -0.56
HMGB2-201ENST00000296503 LOC105369274A0A096LPK9 316 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 LOC102723532A0A0G2JNH3 316 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 C21orf140B9A014 251 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 H3BMH7 237 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 ANXA5P08758 320 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 CRABP2P29373 138 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 RORAP35398 523 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 ERV3-1Q14264 604 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 CSHL1Q14406 222 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 GRM7Q14831 915 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 FAM214AQ32MH5 1076 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 TAF1BQ53T94 588 aaPredicted RBP11.56□□□□□ -0.56
HMGB2-201ENST00000296503 MLIPQ5VWP3 458 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 LCN10Q6JVE6 187 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 RHBDD2Q6NTF9 364 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 TTLL10Q6ZVT0 673 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 CMC1Q7Z7K0 106 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 ADAMTSL2Q86TH1 951 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 PAQR7Q86WK9 346 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 KIRREL3Q8IZU9 778 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 OR4N4Q8N0Y3 316 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 FITM2Q8N6M3 262 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 DRAXINQ8NBI3 349 aaPredicted RBP11.56□□□□□ -0.56
HMGB2-201ENST00000296503 FBXL8Q96CD0 374 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 DPH2Q9BQC3 489 aaPredicted RBP11.56□□□□□ -0.56
HMGB2-201ENST00000296503 GPR87Q9BY21 358 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 VCXQ9H320 206 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 LGALS13Q9UHV8 139 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 SRPK3Q9UPE1 567 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 OARD1Q9Y530 152 aa11.56□□□□□ -0.56
HMGB2-201ENST00000296503 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 IGKV1-8A0A0C4DH67 115 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 POC1B-GALNT4F8VUJ3 575 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 SKAP2O75563 359 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 INHBAP08476 426 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 NPPBP16860 134 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 HRH2P25021 359 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ATP6V0D1P61421 351 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 DCDP81605 110 aaKnown RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 BMPR2Q13873 1038 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ZNF425Q6IV72 752 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 LCTLQ6UWM7 567 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 RNF44Q7L0R7 432 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 PLD3Q8IV08 490 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 RERGQ96A58 199 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ARHGAP9Q9BRR9 750 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 HAUS8Q9BT25 410 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 SGPP1Q9BX95 441 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 CUTCQ9NTM9 273 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 GPN3Q9UHW5 284 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 TLK1Q9UKI8 766 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 NCF1BA6NI72 391 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 NCF1CA8MVU1 366 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 C9J4A7 227 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 H0YGG7 62 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 CREG1O75629 220 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 WISP3O95389 354 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 NCF1P14598 390 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 CD1DP15813 335 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 PTPN4P29074 926 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 SH3BGRP55822 239 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ARF3P61204 181 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 KLC1Q07866 573 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 DYNC1I2Q13409 638 aaKnown RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 PPP1R3AQ16821 1122 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ZXDCQ2QGD7 858 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ZNF517Q6ZMY9 492 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 GPSM1Q86YR5 675 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 OR56A3Q8NH54 315 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 PROKR1Q8TCW9 393 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 EXTL1Q92935 676 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 FAM192AQ9GZU8 254 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ACTL8Q9H568 366 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■□□□ 12.1
HMGB2-201ENST00000296503 IFT80Q9P2H3 777 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-201ENST00000296503 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 PCDHGA6Q9Y5G7 932 aa11.55□□□□□ -0.56
HMGB2-201ENST00000296503 HEATR5BQ9P2D3 2071 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms