RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TMEM145Q8NBT3 493 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 NKD2Q969F2 451 aaPredicted RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ZBED6CLQ96FA7 236 aaPredicted RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 DGAT2Q96PD7 388 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 DISC1C4P0D8 188 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 BLOC1S5-TXNDC5H3BN57 136 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 TLX2O43763 284 aaPredicted RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 PLGP00747 810 aaPredicted RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ITGA5P08648 1049 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 RPL10P27635 214 aaKnown RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 CD97P48960 835 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 RASGEF1BQ0VAM2 473 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 SLC35F1Q5T1Q4 408 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 CNIH3Q8TBE1 160 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 TSNAXQ99598 290 aaKnown RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 SLC22A14Q9Y267 594 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 A0A0J9YVX5 310 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 HYKKA2RU49 373 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 K7EPI3 171 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 HCRTO43612 131 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 IMPDH1P20839 514 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ZBED5Q49AG3 693 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 SYPL2Q5VXT5 272 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 NCBP2-AS2Q69YL0 99 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 C1orf52Q8N6N3 182 aaKnown RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 OR51I1Q9H343 314 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 RUVBL1Q9Y265 456 aaKnown RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 A8MT66 165 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 APLP1P51693 650 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ERVK-8P63133 956 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 MAB21L1Q13394 359 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 OR52E4Q8NGH9 312 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ASB9Q96DX5 294 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 SSU72Q9NP77 194 aaKnown RBP15.69■□□□□ 0.1
SSRP1-202ENST00000293880 MS4A12Q9NXJ0 267 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 P2RX2Q9UBL9 471 aa15.69■□□□□ 0.1
SSRP1-202ENST00000293880 ZNF726A6NNF4 738 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ID2Q02363 134 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 METTL21CQ5VZV1 264 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 TXNRD3NBQ6F5E7 133 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ENPP7Q6UWV6 458 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 COL20A1Q9P218 1284 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 POP4O95707 220 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 SLC6A4P31645 630 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 WDR4P57081 412 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 IRGQQ8WZA9 623 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 GTPBP2Q9BX10 602 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 TAC3Q9UHF0 121 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 C14orf166Q9Y224 244 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 J3KR12 359 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 TNFRSF10BO14763 440 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 CKMT1AP12532 417 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ARL2P36404 184 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 PTGER3P43115 390 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 CCR8P51685 355 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ENPP2Q13822 863 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 HSD17B12Q53GQ0 312 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ANO7Q6IWH7 933 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 TMEM209Q96SK2 561 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 MKLN1Q9UL63 735 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 MROH2AA6NES4 1674 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 A0A1W2PPL8 197 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 MAGEA8P43361 318 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 RIN1Q13671 783 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ABHD13Q7L211 337 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 TDRPQ86YL5 185 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ZSCAN1Q8NBB4 408 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 MSLNLQ96KJ4 702 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 PRKACBP22694 351 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 CTU1Q7Z7A3 348 aaKnown RBP15.68■□□□□ 0.1
SSRP1-202ENST00000293880 ELOVL2Q9NXB9 296 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 PCDHA2Q9Y5H9 948 aa15.68■□□□□ 0.1
SSRP1-202ENST00000293880 UBXN7O94888 489 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 GRPRP30550 384 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 IL10RBQ08334 325 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 MAD2L1BPQ15013 274 aaPredicted RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 DUOXA1Q1HG43 343 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 SOWAHAQ2M3V2 549 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 HCN3Q9P1Z3 774 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 RNF11Q9Y3C5 154 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NPIPA5E9PKD4 350 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 C6orf47O95873 294 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 HOXB6P17509 224 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 MPIP34949 423 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PPP1R3AQ16821 1122 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 CARD16Q5EG05 197 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 TMEM80Q96HE8 168 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PYURFQ96I23 114 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 TMEM246Q9BRR3 403 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 UCK2Q9BZX2 261 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NPIPA1Q9UND3 350 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 CAPN14A8MX76 684 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 VILLO15195 856 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 INPPL1O15357 1258 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms