RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 CPTPQ5TA50 214 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 PGBD3Q8N328 593 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 SLC15A4Q8N697 577 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 FAR1Q8WVX9 515 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 GLYATL1Q969I3 302 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 NEIL2Q969S2 332 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 PLEKHA8Q96JA3 519 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 RAD21L1Q9H4I0 556 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 GMEB1Q9Y692 573 aa19.25■□□□□ 0.67
SCUBE1-201ENST00000290460 ATG13O75143 517 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 UGT2B11O75310 529 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 MYO1DO94832 1006 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 CATP04040 527 aaKnown RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 GBAP04062 536 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 HOXB6P17509 224 aaKnown RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 FPR1P21462 350 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 ERVFC1P60507 584 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 TMEM115Q12893 351 aaPredicted RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 ACOX1Q15067 660 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 CAPN13Q6MZZ7 669 aaPredicted RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 ERICH5Q6P6B1 374 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 TMEM220Q6QAJ8 160 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 Q6ZNX1 250 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 EIF3MQ7L2H7 374 aaKnown RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 TRIM74Q86UV6 250 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 PARP8Q8N3A8 854 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 GIPC3Q8TF64 312 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 POP5Q969H6 163 aaKnown RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 UBE2FQ969M7 185 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 TBC1D20Q96BZ9 403 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 WRAP53Q9BUR4 548 aaKnown RBP19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 KIF17Q9P2E2 1029 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 IL36AQ9UHA7 158 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 SH2B3Q9UQQ2 575 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 GMPPBQ9Y5P6 360 aa19.24■□□□□ 0.67
SCUBE1-201ENST00000290460 GNG14A0A1W2PPG7 69 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 SLC5A10A0PJK1 596 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 NDUFS2O75306 463 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CLPXO76031 633 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CLTBP09497 229 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 LINC00271P0C7V0 271 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 HNF4AP41235 474 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 METAP1P53582 386 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 RPS13P62277 151 aaKnown RBP19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 NTHL1P78549 312 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 PIWIL3Q7Z3Z3 882 aaKnown RBP19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 TECPR1Q7Z6L1 1165 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 TMPRSS11BQ86T26 416 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 TTC29Q8NA56 475 aaPredicted RBP19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ATG16L2Q8NAA4 619 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ATL1Q8WXF7 558 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ZNF566Q969W8 418 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 AP2M1Q96CW1 435 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 TCF25Q9BQ70 676 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 SH3BP4Q9P0V3 963 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 GULP1Q9UBP9 304 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ENPP5Q9UJA9 477 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 COQ6Q9Y2Z9 468 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 C1orf226A1L170 272 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ZNF99A8MXY4 864 aaPredicted RBP19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ELFN1P0C7U0 828 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 SYN1P17600 705 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CD6P30203 668 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 PRLHRP49683 370 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CTF1Q16619 201 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CATSPEREQ5SY80 951 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 C16orf87Q6PH81 154 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 SETD9Q8NE22 299 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 GLMNQ92990 594 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 TIFAQ96CG3 184 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 ZSWIM3Q96MP5 696 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CCM2Q9BSQ5 444 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CHST8Q9H2A9 424 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 RASSF1Q9NS23 344 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 THUMPD1Q9NXG2 353 aaKnown RBP19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 CCDC88CQ9P219 2028 aa19.23■□□□□ 0.67
SCUBE1-201ENST00000290460 IDSP22304 550 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 VEGFBP49765 207 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 NPTX1Q15818 432 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 PLPP4Q5VZY2 271 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 ANGPTL8Q6UXH0 198 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 CCDC81Q6ZN84 652 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 CCDC71Q8IV32 467 aaPredicted RBP19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 NPAS3Q8IXF0 933 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 SMYD1Q8NB12 490 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 OR56A3Q8NH54 315 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 LZICQ8WZA0 190 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 ASPSCR1Q9BZE9 553 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 REEP1Q9H902 201 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 KRT84Q9NSB2 600 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 RAPGEFL1Q9UHV5 662 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 MGAT4DA6NG13 374 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 M0QX08 132 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 SAP18O00422 153 aaKnown RBP19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 RHOP08100 348 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 MMP12P39900 470 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 KEAP1Q14145 624 aa19.22■□□□□ 0.67
SCUBE1-201ENST00000290460 RGNQ15493 299 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms