RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TEX26Q8N6G2 289 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 C11orf65Q8NCR3 313 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 FKBP10Q96AY3 582 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 DNAJC11Q9NVH1 559 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 MED16Q9Y2X0 877 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 AGAP5A6NIR3 686 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 M0QX08 132 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 PCDHGA12O60330 932 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TNFRSF21O75509 655 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 GNRH1P01148 92 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 HOXD9P28356 352 aaPredicted RBP12.97□□□□□ -0.33
SCAF4-201ENST00000286835 PCBP2Q15366 365 aaKnown RBP eCLIP12.97□□□□□ -0.335e-12■■■□□ 19.2
SCAF4-201ENST00000286835 DUOXA1Q1HG43 343 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 FRG2Q64ET8 278 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 SBSNQ6UWP8 590 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TRPV1Q8NER1 839 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 FRG2BQ96QU4 278 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 MIEF1Q9NQG6 463 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 CTPS2Q9NRF8 586 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 KCTD5Q9NXV2 234 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 ADH1AP07327 375 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TNNI3P19429 210 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 RAB25P57735 213 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TUBA1BP68363 451 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 SLC35A2P78381 396 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 TUBA1AQ71U36 451 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 GALNT12Q8IXK2 581 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 C10orf111Q8N326 155 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 SLC5A8Q8N695 610 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 DIRAS2Q96HU8 199 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCAF4-201ENST00000286835 PKP4Q99569 1192 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 CRISPLD1Q9H336 500 aa12.97□□□□□ -0.33
SCAF4-201ENST00000286835 MAP1BP46821 2468 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 WNT9AO14904 365 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 KDELR3O43731 214 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 APOL3O95236 402 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 FGBP02675 491 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 C1DQ13901 141 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 C19orf18Q8NEA5 215 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 ACAT2Q9BWD1 397 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 CPNE5Q9HCH3 593 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 THG1LQ9NWX6 298 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 URB1O60287 2271 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 NUAK1O60285 661 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 TSPAN12O95859 305 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 PRR35P0CG20 571 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 SDC1P18827 310 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 CSKP41240 450 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 SLC11A1P49279 550 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 NFATC2Q13469 925 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 ERICH5Q6P6B1 374 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 ZNF517Q6ZMY9 492 aaPredicted RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 DEF8Q6ZN54 512 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 SNX20Q7Z614 316 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 NLGN4XQ8N0W4 816 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 C1orf52Q8N6N3 182 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 PHF21AQ96BD5 680 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 RHBDF1Q96CC6 855 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 BRD9Q9H8M2 597 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
SCAF4-201ENST00000286835 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.33
SCAF4-201ENST00000286835 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 NOTOA8MTQ0 251 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 H3BM21 787 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 M0QZQ0 153 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 LAMP1P11279 417 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 IFI30P13284 250 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 SPAM1P38567 509 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 CLDN8P56748 225 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 OLR1P78380 273 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 MRPL28Q13084 256 aaKnown RBP12.96□□□□□ -0.34
SCAF4-201ENST00000286835 KRT33BQ14525 404 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 SETMARQ53H47 684 aaPredicted RBP12.96□□□□□ -0.34
SCAF4-201ENST00000286835 AFMIDQ63HM1 303 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 KRT73Q86Y46 540 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 FCGR1BQ92637 280 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 CLMPQ9H6B4 373 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF639Q9UID6 485 aa12.96□□□□□ -0.34
SCAF4-201ENST00000286835 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.34
SCAF4-201ENST00000286835 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms