RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CCDC92Q53HC0 331 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 SOWAHCQ53LP3 525 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 CCDC103Q8IW40 242 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 CPA6Q8N4T0 437 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 FEVQ99581 238 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 C19orf43Q9BQ61 176 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 CORO1BQ9BR76 489 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 MIR1-1HGQ9H1L0 117 aa12.79□□□□□ -0.36
SLC28A1-201ENST00000286749 TAF4O00268 1085 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DSCR3O14972 297 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 BNIP3LO60238 219 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 KCNK2O95069 426 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 JUPP14923 745 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 CD22P20273 847 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 TNFRSF1BP20333 461 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 HNMTP50135 292 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DNAJC22Q8N4W6 341 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DBF4BQ8NFT6 615 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 SPPL2AQ8TCT8 520 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 GGHQ92820 318 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DUSP26Q9BV47 211 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 RAD18Q9NS91 495 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 GPR83Q9NYM4 423 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ATP11BQ9Y2G3 1177 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 HTTP42858 3142 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 THSD7BQ9C0I4 1608 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 SAGE2PA6NJ88 616 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 TBKBP1A7MCY6 615 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 PRMT3O60678 531 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 IGSF6O95976 241 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 CDK1P06493 297 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 SERPINA4P29622 427 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 IDH2P48735 452 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 IRF8Q02556 426 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DGKKQ5KSL6 1271 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF362Q5T0B9 420 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 TPRG1LQ5T0D9 272 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 SLC46A3Q7Z3Q1 461 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 TSEN54Q7Z6J9 526 aaKnown RBP12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 SLC5A8Q8N695 610 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 RLIMQ9NVW2 624 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 KLHL42Q9P2K6 505 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 VPS29Q9UBQ0 182 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF232Q9UNY5 417 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
SLC28A1-201ENST00000286749 A0A1W2PQ67 120 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 CLCA1A8K7I4 914 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 TNFRSF11BO00300 401 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 NUAK1O60285 661 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF821O75541 412 aaPredicted RBP12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 OPN1SWP03999 348 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 STSP08842 583 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 CYP2A7P20853 494 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 PFN3P60673 137 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 GAB1Q13480 694 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 XKR6Q5GH73 641 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 LRRC73Q5JTD7 316 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 TUBA3EQ6PEY2 450 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 SERPINA13PQ6UXR4 307 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 AMER2Q8N7J2 671 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 OR52J3Q8NH60 311 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 ZNF675Q8TD23 568 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 ADAMTS19Q8TE59 1207 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 DOHHQ9BU89 302 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 CDADC1Q9BWV3 514 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 OR51E2Q9H255 320 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 ELAC1Q9H777 363 aaKnown RBP12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 PRM3Q9NNZ6 103 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 PLCXD1Q9NUJ7 323 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 FAM8A1Q9UBU6 413 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 CLEC4EQ9ULY5 219 aa12.77□□□□□ -0.36
SLC28A1-201ENST00000286749 SERTM1A2A2V5 107 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 M0R129 80 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 EIF3FO00303 357 aaPredicted RBP12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 SNPHO15079 494 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 DPM1O60762 260 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 GCM2O75603 506 aaPredicted RBP12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 RPLP0P05388 317 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 PCSK2P16519 638 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 LHCGRP22888 699 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 MAPK8P45983 427 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 CASP9P55211 416 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 PTSQ03393 145 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 ACSM2AQ08AH3 577 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 CSTF3Q12996 717 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 ACSM2BQ68CK6 577 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 SYTL1Q8IYJ3 562 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 EFHD2Q96C19 240 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms