RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 CFAP20Q9Y6A4 193 aaKnown RBP15.23■□□□□ 0.03
USP43-201ENST00000285199 ZNF701M0R085 212 aaPredicted RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 STX16O14662 325 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 PAPSS2O95340 614 aaPredicted RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 MATN4O95460 622 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 C6orf47O95873 294 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 SBK3P0C264 359 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CDK6Q00534 326 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 DUOXA1Q1HG43 343 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 LHFPL3Q86UP9 236 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 NLGN4XQ8N0W4 816 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 OR6C4Q8NGE1 309 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 OR8J3Q8NGG0 315 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 REPS1Q96D71 796 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 NFKBIL1Q9UBC1 381 aaPredicted RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 CORO2BQ9UQ03 480 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 RUVBL1Q9Y265 456 aaKnown RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 SNAI1O95863 264 aaPredicted RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 KLK1P06870 262 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 PTGS2P35354 604 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 PURAQ00577 322 aaKnown RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 EXOC3L2Q2M3D2 409 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 NOXRED1Q6NXP6 359 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 SUSD1Q6UWL2 747 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 MTSS1LQ765P7 747 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 ZNF280BQ86YH2 543 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 KRT78Q8N1N4 520 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 MSANTD3Q96H12 275 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 ZNF607Q96SK3 696 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 A0A1W2PRB8 838 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 UPK1BO75841 260 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 C7P10643 843 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 BMP7P18075 431 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CELP19835 753 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CD72P21854 359 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 SOX3P41225 446 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CSKP41240 450 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 PREPP48147 710 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CDH4P55283 916 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 FBXW4P57775 412 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 POLR2LP62875 67 aaKnown RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 STEAP3Q658P3 488 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 KCTD11Q693B1 232 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 MEIOBQ8N635 442 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 TMEM174Q8WUU8 243 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 KLHL6Q8WZ60 621 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 SLC9A6Q92581 669 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 KCNJ9Q92806 393 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 ITPKCQ96DU7 683 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 TEFMQ96QE5 360 aaKnown RBP15.22■□□□□ 0.03
USP43-201ENST00000285199 OSBPL10Q9BXB5 764 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 CD244Q9BZW8 370 aa15.22■□□□□ 0.03
USP43-201ENST00000285199 A0A1W2PPK0 400 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 ARHGEF33A8MVX0 844 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 CKBP12277 381 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 ETFAP13804 333 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 GABRR2P28476 465 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 SSR2P43308 183 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 MAPKAPK2P49137 400 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 CCR4P51679 360 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 ZNF45Q02386 682 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 SEMA3AQ14563 771 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 RNF130Q86XS8 419 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 OR6Q1Q8NGQ2 317 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 NPLOC4Q8TAT6 608 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 SCAMP4Q969E2 229 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 SPG21Q9NZD8 308 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 GULP1Q9UBP9 304 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 GUCY1B2O75343 617 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 ARNTP27540 789 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 RYKP34925 604 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 CLCN4P51793 760 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 SCAPQ12770 1279 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 NRARPQ7Z6K4 114 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 B3GNT8Q7Z7M8 397 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 OR10H4Q8NGA5 316 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 OR2T11Q8NH01 316 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 KCTD7Q96MP8 289 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 C12orf4Q9NQ89 552 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 TREX1Q9NSU2 369 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 CFAP97Q9P2B7 532 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 STX11O75558 287 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 OR2B3O76000 313 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 B3GALT4O96024 378 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 DNAJB1P25685 340 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 NSG1P42857 185 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 GPR1P46091 355 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 GSTM4Q03013 218 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 TSPEARQ8WU66 669 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 MAT2BQ9NZL9 334 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 ENTPD4Q9Y227 616 aa15.21■□□□□ 0.03
USP43-201ENST00000285199 TRBV23OR9-2A0A075B6M9 112 aa15.21■□□□□ 0.02
USP43-201ENST00000285199 A0A0G2JLL6 359 aaPredicted RBP15.21■□□□□ 0.02
USP43-201ENST00000285199 AREL1O15033 823 aa15.21■□□□□ 0.02
USP43-201ENST00000285199 GJB5O95377 273 aa15.21■□□□□ 0.02
USP43-201ENST00000285199 FGF4P08620 206 aa15.21■□□□□ 0.02
USP43-201ENST00000285199 RNF144AP50876 292 aaPredicted RBP15.21■□□□□ 0.02
USP43-201ENST00000285199 BNC1Q01954 994 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms