RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 HMGB4Q8WW32 186 aa12.93□□□□□ -0.34
PRDM16-201ENST00000270722 SMPDL3BQ92485 455 aa12.93□□□□□ -0.34
PRDM16-201ENST00000270722 QRSL1Q9H0R6 528 aaKnown RBP12.93□□□□□ -0.34
PRDM16-201ENST00000270722 DKKL1Q9UK85 242 aa12.93□□□□□ -0.34
PRDM16-201ENST00000270722 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
PRDM16-201ENST00000270722 OTOFQ9HC10 1997 aa12.93□□□□□ -0.34
PRDM16-201ENST00000270722 AGRPO00253 132 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 LIASO43766 372 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CIDEAO60543 219 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 RAB3DO95716 219 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 HRH2P25021 359 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ADRA1BP35368 520 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 PQLC1Q8N2U9 271 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SNX15Q9NRS6 342 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 RPL36Q9Y3U8 105 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 VWDEQ8N2E2 1590 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ADH1BP00325 375 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 JUNDP17535 347 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CFL1P23528 166 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 AMZ1Q400G9 498 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ZACNQ401N2 412 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OR2L2Q8NH16 312 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 MS4A12Q9NXJ0 267 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 FAM237BA0A1B0GVD1 139 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 MAN2B1O00754 1011 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 RPS17P08708 135 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 PABPC4LP0CB38 370 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CBSLP0DN79 551 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CBSP35520 551 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 BPIFB1Q8TDL5 484 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ABHD5Q8WTS1 349 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CAPNS2Q96L46 248 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 NPLQ9BXD5 320 aaPredicted RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 DPAGT1Q9H3H5 408 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 KIF13AQ9H1H9 1805 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 HNF1BP35680 557 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 RPS3AP61247 264 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 HERV-K104P61576 105 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 TOR1AIP1Q5JTV8 583 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 LCLAT1Q6UWP7 414 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 TMCO2Q7Z6W1 182 aaPredicted RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 PAQR7Q86WK9 346 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OPA3Q9H6K4 179 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SLC22A2O15244 555 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 TREHO43280 583 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 STBD1O95210 358 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 C15orf52Q6ZUT6 534 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CUZD1Q86UP6 607 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 FAM129CQ86XR2 697 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF599Q96NL3 588 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 LYPLA2O95372 231 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 TSPAN15O95858 294 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SYPP08247 313 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 MATN1P21941 496 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF81P51508 661 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 RNF4P78317 190 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 GALK2Q01415 458 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF676Q8N7Q3 588 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OR10H4Q8NGA5 316 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 OR6K6Q8NGW6 343 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 HDHD5Q9BXW7 423 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 METTL7AQ9H8H3 244 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 NMUR1Q9HB89 426 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 EFCAB9A8MZ26 197 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ADH6P28332 368 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SOX9P48436 509 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 SP140Q13342 867 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ARHGAP40Q5TG30 622 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 NUS1Q96E22 293 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ARL6IP5O75915 188 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TSPAN8P19075 237 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ITPKAP23677 461 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PMPCAQ10713 525 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 RAB35Q15286 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms