RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NME4O00746 187 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 ACOT8O14734 319 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SEMA3DO95025 777 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CCNDBP1O95273 360 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 PSMG1O95456 288 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TGFB1P01137 390 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CELA2BP08218 269 aaPredicted RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 PHC1P78364 1004 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 ZXDAP98168 799 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 PWP1Q13610 501 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CAPRIN1Q14444 709 aaKnown RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 KIR2DS5Q14953 304 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SYT12Q8IV01 421 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 ADGRF3Q8IZF5 1079 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 OR2L3Q8NG85 312 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 OR4E2Q8NGC2 313 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■□□□□ 10.4
TPM1-201ENST00000267996 JADE3Q92613 823 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 GTF2H4Q92759 462 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TMEM125Q96AQ2 219 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SARGQ9BW04 601 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MS4A8Q9BY19 250 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 OR51B5Q9H339 312 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SLC6A20Q9NP91 592 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MRPS30Q9NP92 439 aaKnown RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 POT1Q9NUX5 634 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TMEM184CQ9NVA4 438 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CMTM6Q9NX76 183 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SLAMF8Q9P0V8 285 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 NKX1-2Q9UD57 310 aaPredicted RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 ABCA7Q8IZY2 2146 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 EML5Q05BV3 1969 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TRBV23OR9-2A0A075B6M9 112 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TRBC2A0A5B9 178 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TLR4O00206 839 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 BCAS2O75934 225 aaPredicted RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 KRT36O76013 467 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CSF2P04141 144 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CTSEP14091 401 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 NME1P15531 152 aaKnown RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 JUNDP17535 347 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 BCKDHBP21953 392 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 HRH2P25021 359 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 ASMTP46597 345 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MS4A2Q01362 244 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 SF1Q15637 639 aaKnown RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 PRRT3Q5FWE3 981 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 DEPDC1Q5TB30 811 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 ZNF425Q6IV72 752 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MSANTD1Q6ZTZ1 278 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 COMMD6Q7Z4G1 85 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 DHDDSQ86SQ9 333 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 KIAA2013Q8IYS2 634 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 RNF148Q8N7C7 305 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 JPH3Q8WXH2 748 aaPredicted RBP15.7■□□□□ 0.1
TPM1-201ENST00000267996 DNASE2BQ8WZ79 361 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 HSPA12BQ96MM6 686 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 LRRC61Q9BV99 259 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 TM9SF3Q9HD45 589 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 CPNE7Q9UBL6 633 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MAPRE3Q9UPY8 281 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 MAN2B2Q9Y2E5 1009 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 NEUROG3Q9Y4Z2 214 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 C15orf38-AP3S2A0A0A6YYH1 394 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 BTN3A3O00478 584 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 MAP3K13O43283 966 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 SH3BGRLO75368 114 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 KLHL18O94889 574 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 ANXA4P09525 319 aaPredicted RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 HSD17B1P14061 328 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 MAOBP27338 520 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 CMPK1P30085 196 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 S100A3P33764 101 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 HNRNPFP52597 415 aaKnown RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 TRAP1Q12931 704 aaKnown RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 TRIM25Q14258 630 aaKnown RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 KIR2DS3Q14952 304 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 MAPKAPK3Q16644 382 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 UGT8Q16880 541 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 DPY19L1Q2PZI1 675 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 CWF19L1Q69YN2 538 aaKnown RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 AAGABQ6PD74 315 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 ARPINQ7Z6K5 226 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 TAF8Q7Z7C8 310 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 SLC9B2Q86UD5 537 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 FBXL6Q8N531 539 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 GPR156Q8NFN8 814 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 DNAJB8Q8NHS0 232 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 FLVCR1-AS1Q8TAF5 88 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 STARD8Q92502 1023 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 STMN2Q93045 179 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 ASB9Q96DX5 294 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 OR52E6Q96RD3 313 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 DUSP15Q9H1R2 295 aaPredicted RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 SRMSQ9H3Y6 488 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 APOBEC3BQ9UH17 382 aaKnown RBP15.69■□□□□ 0.1
TPM1-201ENST00000267996 COL6A3P12111 3177 aa15.69■□□□□ 0.1
TPM1-201ENST00000267996 SNRNP200O75643 2136 aaKnown RBP15.68■□□□□ 0.1
TPM1-201ENST00000267996 CCDC163A0A0D9SF12 145 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms