RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NCSTNQ92542 709 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 CHCHD6Q9BRQ6 235 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 CDH7Q9ULB5 785 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 A8MU76 341 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 REM1O75628 298 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 BCAS2O75934 225 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 GIMD1P0DJR0 217 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 POLR2CP19387 275 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 PPP1R8Q12972 351 aaKnown RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 PPP1R3AQ16821 1122 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 DENND1AQ8TEH3 1009 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 FAM83CQ9BQN1 747 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 CPSF4LA6NMK7 179 aaKnown RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 ATP4BP51164 291 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 DSC1Q08554 894 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 CST6Q15828 149 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 TOR1AIP1Q5JTV8 583 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 KRT77Q7Z794 578 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 BORCS5Q969J3 196 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 COX4I2Q96KJ9 171 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 RNF38Q9H0F5 515 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 AMBNQ9NP70 447 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 LOC110117498-PIK3R3F6TDL0 507 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 RNGTTO60942 597 aaKnown RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 ECDO95905 644 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 BCHEP06276 602 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 NR4A1P22736 598 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 SLC6A4P31645 630 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 MLLT3P42568 568 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 OMPP47874 163 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 GPR68Q15743 365 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 TRNP1Q6NT89 227 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF784Q8NCA9 323 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 TMBIM1Q969X1 311 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 KLF16Q9BXK1 252 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 TRBC2A0A5B9 178 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 A8MUA0 341 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 H3BQ06 376 aaPredicted RBP14.93□□□□□ -0.02
TIMP3-201ENST00000266085 SNPHO15079 494 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 AIREO43918 545 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 CREG1O75629 220 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 CLCN7P51798 805 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 UNC50Q53HI1 259 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 LIPJQ5W064 366 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 WDR92Q96MX6 357 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 OR51V1Q9H2C8 321 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 TRIM39Q9HCM9 518 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 HRASLS2Q9NWW9 162 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 OARD1Q9Y530 152 aa14.93□□□□□ -0.02
TIMP3-201ENST00000266085 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 H7C0S8 307 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 SLC16A5O15375 505 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 TCEA1P23193 301 aaKnown RBP14.92□□□□□ -0.02
TIMP3-201ENST00000266085 IL12AP29459 219 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 PTGR1Q14914 329 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 PCBP2Q15366 365 aaKnown RBP eCLIP14.92□□□□□ -0.022e-7■■■■■ 40.7
TIMP3-201ENST00000266085 PRRT3Q5FWE3 981 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 CRTC1Q6UUV9 634 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 ARHGAP12Q8IWW6 846 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 SCML4Q8N228 414 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 TCEAL4Q96EI5 215 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 PKP4Q99569 1192 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 RC3H2Q9HBD1 1191 aaKnown RBP14.92□□□□□ -0.02
TIMP3-201ENST00000266085 SAGE1Q9NXZ1 904 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 HCFC2Q9Y5Z7 792 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 MID1O15344 667 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 PRAMEF12O95522 483 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 MPC1LP0DKB6 136 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 C1orf61Q13536 156 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF630Q2M218 657 aaPredicted RBP14.92□□□□□ -0.02
TIMP3-201ENST00000266085 KCTD8Q6ZWB6 473 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 USP30Q70CQ3 517 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 IQCHQ86VS3 1027 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 IFT27Q9BW83 186 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 GPR174Q9BXC1 333 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 STON1Q9Y6Q2 735 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 A0A0U1RQS6 177 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 VEGFDO43915 354 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 ATF6P18850 670 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 FDXRP22570 491 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 SHMT2P34897 504 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 CCT3P49368 545 aaKnown RBP14.92□□□□□ -0.02
TIMP3-201ENST00000266085 NOXRED1Q6NXP6 359 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 TRIB3Q96RU7 358 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 C17orf62Q9BQA9 187 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 BOCQ9BWV1 1114 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 FAM53CQ9NYF3 392 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 CEP290O15078 2479 aa14.92□□□□□ -0.02
TIMP3-201ENST00000266085 QPRTQ15274 297 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 EMC10Q5UCC4 262 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 KIAA0319Q5VV43 1072 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 RELTQ969Z4 430 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 IL17FQ96PD4 163 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 IL17CQ9P0M4 197 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 MKL2Q9ULH7 1088 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms