RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TLR1Q15399 786 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 LRRC8EQ6NSJ5 796 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 UGT3A1Q6NUS8 523 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PAQR3Q6TCH7 311 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 ISLR2Q6UXK2 745 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 VN1R4Q7Z5H5 301 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PCGF5Q86SE9 256 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 CNTN4Q8IWV2 1026 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 KBTBD2Q8IY47 623 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PSMF1Q92530 271 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 NAT9Q9BTE0 207 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 DRC3Q9H069 523 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PCBD2Q9H0N5 130 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 PARVBQ9HBI1 364 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PLAC1Q9HBJ0 212 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 MKKSQ9NPJ1 570 aaPredicted RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 CCDC177Q9NQR7 707 aaPredicted RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 C14orf105Q9NVL8 296 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 TAS2R13Q9NYV9 303 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 ASIC3Q9UHC3 531 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 TRMT6Q9UJA5 497 aaKnown RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 ADAMTS6Q9UKP5 1117 aa9.23□□□□□ -0.93
VPS41-201ENST00000265745 PRRC2CQ9Y520 2896 aaKnown RBP9.23□□□□□ -0.93
VPS41-201ENST00000265745 LOC102723996A0A087X1L8 192 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 NSG1A0A0A6YYJ2 146 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 PCDH17O14917 1159 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 SLC16A5O15375 505 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 TSPAN12O95859 305 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 DDAH2O95865 285 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 IL2RAP01589 272 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 SERPINA7P05543 415 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 C8GP07360 202 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 HEXBP07686 556 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 PRR35P0CG20 571 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 TCP1P17987 556 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 FDXRP22570 491 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 CXCR2P25025 360 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 TSFMP43897 325 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 RGS4P49798 205 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 EFNA3P52797 238 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 PSMA6P60900 246 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 RPS15AP62244 130 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 TBPL1P62380 186 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 CSNK1G2P78368 415 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 SP140Q13342 867 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 MFAP5Q13361 173 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 ZNF169Q14929 603 aaPredicted RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 NDUFA9Q16795 377 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 PHKG1Q16816 387 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 SYT16Q17RD7 645 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 ZXDCQ2QGD7 858 aaPredicted RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 C4orf17Q53FE4 359 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 SPANXN3Q5MJ09 141 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 RBM20Q5T481 1227 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 B3GNTL1Q67FW5 361 aaPredicted RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 AGTRAPQ6RW13 159 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 TMEM205Q6UW68 189 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 MBOAT1Q6ZNC8 495 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 LINC00696Q6ZRV3 163 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 KIAA0408Q6ZU52 694 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 GALNT7Q86SF2 657 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 ZC3H7AQ8IWR0 971 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 OR9A4Q8NGU2 314 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 GABPB2Q8TAK5 448 aaPredicted RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 SGPP1Q9BX95 441 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 ATG10Q9H0Y0 220 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 KCNF1Q9H3M0 494 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 EPS8L2Q9H6S3 715 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 AGPAT4Q9NRZ5 378 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 ERRFI1Q9UJM3 462 aaPredicted RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 SH2B3Q9UQQ2 575 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 MRPS2Q9Y399 296 aaKnown RBP9.22□□□□□ -0.93
VPS41-201ENST00000265745 POLEQ07864 2286 aa9.22□□□□□ -0.93
VPS41-201ENST00000265745 CNTRLQ7Z7A1 2325 aa9.21□□□□□ -0.93
VPS41-201ENST00000265745 FER1L5A0AVI2 2057 aa9.21□□□□□ -0.93
VPS41-201ENST00000265745 IGHV1-45A0A0A0MS14 117 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 H0YIG0 161 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 LCMT2O60294 686 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 BMP10O95393 424 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 NSA2O95478 260 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 STATHP02808 62 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 NPPBP16860 134 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 AVPR1BP47901 424 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 IL2P60568 153 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 MAT1AQ00266 395 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 CDC16Q13042 620 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 NAE1Q13564 534 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 ESPL1Q14674 2120 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 TEDDM1Q5T9Z0 273 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 HIST2H2BCQ6DN03 193 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 FAAH2Q6GMR7 532 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 RIPOR1Q6ZS17 1223 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 C17orf64Q86WR6 236 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms