RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 DUSP26Q9BV47 211 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 NTMT1Q9BV86 223 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SUV39H2Q9H5I1 410 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 C5AR2Q9P296 337 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 VPS29Q9UBQ0 182 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CFAP20Q9Y6A4 193 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 TSPAN6O43657 245 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 UGT2B11O75310 529 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SLC16A8O95907 504 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CYP2A7P20853 494 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SLC19A1P41440 591 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 ALDH9A1P49189 494 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CBX2Q14781 532 aaPredicted RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CPTPQ5TA50 214 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 ATG9BQ674R7 924 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 OTOP2Q7RTS6 562 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SETD9Q8NE22 299 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 MRPS31Q92665 395 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 IGSF21Q96ID5 467 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 Q96MT0 163 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 RIOK2Q9BVS4 552 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 MRPL17Q9NRX2 175 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 IMPAD1Q9NX62 359 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 ZDHHC3Q9NYG2 299 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 TRPS1Q9UHF7 1281 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 A0A0G2JN53 185 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 TRIM64A6NGJ6 449 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 PLK4O00444 970 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CCL16O15467 120 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 AIREO43918 545 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CNOT3O75175 753 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 STSP08842 583 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SRCP12931 536 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 AMD1P17707 334 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 PCMT1P22061 227 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 LIPAP38571 399 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 NPRL3Q12980 569 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 GAB1Q13480 694 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 USP7Q93009 1102 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 CCDC115Q96NT0 180 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 KCNS3Q9BQ31 491 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 TTLL2Q9BWV7 592 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
SEC23B-201ENST00000262544 IL1RAPQ9NPH3 570 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 USE1Q9NZ43 259 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 PLAGL1Q9UM63 463 aa12.51□□□□□ -0.41
SEC23B-201ENST00000262544 GABRR3A8MPY1 467 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SCAMP1O15126 338 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SOX14O95416 240 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 URODP06132 367 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 RETP07949 1114 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 PAX3P23760 479 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 CD6P30203 668 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 DNAJA1P31689 397 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 CTSCP53634 463 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 RPS13P62277 151 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 FAM26DQ5JW98 314 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SHQ1Q6PI26 577 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 GAREM2Q75VX8 874 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 CADM3Q8N126 398 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 ADAMTS19Q8TE59 1207 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 PALMDQ9NP74 551 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 TMEM98Q9Y2Y6 226 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 TRIOO75962 3097 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 MYO1DO94832 1006 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 HPRP00739 348 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SERPIND1P05546 499 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SLC10A3P09131 477 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 ATP1B2P14415 290 aaPredicted RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 GADD45AP24522 165 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 AZGP1P25311 298 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 IRF5Q13568 498 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 THOC6Q86W42 341 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 RAVER1Q8IY67 606 aaKnown RBP12.5□□□□□ -0.41
SEC23B-201ENST00000262544 UBE2J2Q8N2K1 259 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 SLC5A8Q8N695 610 aa12.5□□□□□ -0.41
SEC23B-201ENST00000262544 OR51E2Q9H255 320 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms