RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GOLGA4Q13439 2230 aaKnown RBP16.79■□□□□ 0.28
SRSF1-201ENST00000258962 A0A1W2PPV9 198 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 NR5A2O00482 541 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ANKRD28O15084 1053 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 RSL1D1O76021 490 aaKnown RBP16.79■□□□□ 0.28
SRSF1-201ENST00000258962 C1GALT1C1LP0DN25 315 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 CAPN3P20807 821 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 IL12AP29459 219 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 RAP1GDS1P52306 607 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ZNF33BQ06732 778 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 FOXC1Q12948 553 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 SNCBQ16143 134 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 C6orf163Q5TEZ5 329 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ADNP2Q6IQ32 1131 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ZCCHC8Q6NZY4 707 aaKnown RBP16.79■□□□□ 0.28
SRSF1-201ENST00000258962 CYP20A1Q6UW02 462 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 WASH2PQ6VEQ5 465 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 SLCO6A1Q86UG4 719 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 GKN2Q86XP6 184 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 NRROSQ86YC3 692 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ULK2Q8IYT8 1036 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 DEFB107AQ8IZN7 70 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 LINC01555Q8NAE3 123 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 SLC5A11Q8WWX8 675 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 SPNS1Q9H2V7 528 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 EHD1Q9H4M9 534 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 MVB12BQ9H7P6 319 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 EFCAB1Q9HAE3 211 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 WASH6PQ9NQA3 447 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 NDE1Q9NXR1 346 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ASIC5Q9NY37 505 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 ZIM2Q9NZV7 527 aa16.79■□□□□ 0.28
SRSF1-201ENST00000258962 A6NCN8 305 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 YY2O15391 372 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 GIMD1P0DJR0 217 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 G6PDP11413 515 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 PKLRP30613 574 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 DUSP3P51452 185 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 YBX1P67809 324 aaKnown RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 CSTF3Q12996 717 aaKnown RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 STX5Q13190 355 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 SLBPQ14493 270 aaKnown RBP eCLIP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 PROX2Q3B8N5 592 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 THEMIS2Q5TEJ8 643 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 BLOC1S3Q6QNY0 202 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 NXPE4Q6UWF7 544 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 TAF8Q7Z7C8 310 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 FAM181AQ8N9Y4 354 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 OR7G3Q8NG95 312 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 OR52E1Q8NGJ3 308 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 PROKR1Q8TCW9 393 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 SMPDL3AQ92484 453 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 CMTM7Q96FZ5 175 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 HAUS8Q9BT25 410 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 GEMIN8Q9NWZ8 242 aaKnown RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 TRNAU1APQ9NX07 287 aaKnown RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 TAC3Q9UHF0 121 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 ICKQ9UPZ9 632 aa16.78■□□□□ 0.28
SRSF1-201ENST00000258962 ARHGEF17Q96PE2 2063 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-201ENST00000258962 DNAH14Q0VDD8 3507 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 NRP2O60462 931 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 SEC22BO75396 215 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 SLC22A3O75751 556 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 CDH1P12830 882 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 PSMB5P28074 263 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 ACTR1BP42025 376 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 ACTR1AP61163 376 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 TBL3Q12788 808 aaKnown RBP16.77■□□□□ 0.28
SRSF1-201ENST00000258962 MAD2L1Q13257 205 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-201ENST00000258962 RCAN2Q14206 197 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 MED27Q6P2C8 311 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 SLC30A9Q6PML9 568 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 C16orf89Q6UX73 402 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 RETREG3Q86VR2 466 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 SCUBE1Q8IWY4 988 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 APIPQ96GX9 242 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 APOLD1Q96LR9 279 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 EFCAB11Q9BUY7 163 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 ACAT2Q9BWD1 397 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 DENND2DQ9H6A0 471 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-201ENST00000258962 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 TMEM45AQ9NWC5 275 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 PCDHGA11Q9Y5H2 935 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 PCDHGA1Q9Y5H4 931 aa16.77■□□□□ 0.28
SRSF1-201ENST00000258962 NCOR2Q9Y618 2525 aa16.77■□□□□ 0.27
SRSF1-201ENST00000258962 PIPSLA2A3N6 862 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 ASPDHA6ND91 283 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 ZNF839A8K0R7 811 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 BBIP1A8MTZ0 92 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 MRASO14807 208 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 CDK4P11802 303 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 RAB28P51157 221 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRSF1-201ENST00000258962 ART3Q13508 389 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 DDX39BQ13838 428 aaKnown RBP16.76■□□□□ 0.27
SRSF1-201ENST00000258962 VPS26BQ4G0F5 336 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 PGM2L1Q6PCE3 622 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 LAS2Q8IYD9 372 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 PGAM4Q8N0Y7 254 aa16.76■□□□□ 0.27
SRSF1-201ENST00000258962 LIX1Q8N485 282 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms