RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FAM124AQ86V42 546 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 UBASH3BQ8TF42 649 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 COQ8BQ96D53 544 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 TPD52L3Q96J77 140 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 MAP6Q96JE9 813 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 EGFL8Q99944 293 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 CCM2Q9BSQ5 444 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 FAM126AQ9BYI3 521 aaPredicted RBP11.13□□□□□ -0.63
TROAP-201ENST00000257909 CD244Q9BZW8 370 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 FAM83DQ9H4H8 585 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 DUSP12Q9UNI6 340 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 DLGAP4Q9Y2H0 992 aa11.13□□□□□ -0.63
TROAP-201ENST00000257909 TEX51A0A1B0GUA7 166 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 LINC00854A0A1B0GVQ3 168 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 A0A1W2PQH9 124 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 TNFRSF11BO00300 401 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C1QBP02746 253 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SMIM10L2AP0DMW4 78 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SMIM10L2BP0DMW5 78 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 ENGP17813 658 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 POLR2CP19387 275 aaPredicted RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 KCNJ10P78508 379 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 QPRTQ15274 297 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SSX1Q16384 188 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 DUOXA1Q1HG43 343 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PTOV1Q86YD1 416 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 LAX1Q8IWV1 398 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 LSMEM1Q8N8F7 131 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C8orf48Q96LL4 319 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 BARHL1Q9BZE3 327 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 ZNF556Q9HAH1 456 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 EXOSC4Q9NPD3 245 aaKnown RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 ELOVL2Q9NXB9 296 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 WWOXQ9NZC7 414 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 MOSPD1Q9UJG1 213 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PTPRDP23468 1912 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 LOC730098B7Z3J9 87 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SUV39H1O43463 412 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 MPZL2O60487 215 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SCG5P05408 212 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 OR1E1P30953 314 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 ACVRL1P37023 503 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 KIR3DL1P43629 444 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 RGS4P49798 205 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 KCNQ1P51787 676 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.635e-7■■■■□ 19.5
TROAP-201ENST00000257909 GLYR1Q49A26 553 aaPredicted RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 FBXL22Q6P050 247 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 FAM131AQ6UXB0 335 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 CCDC149Q6ZUS6 474 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 YIPF7Q8N8F6 280 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 OR10G2Q8NGC3 310 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 UTP15Q8TED0 518 aaKnown RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 IGSF8Q969P0 613 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PANX1Q96RD7 426 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 MGME1Q9BQP7 344 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 SPATA9Q9BWV2 254 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 C11orf54Q9H0W9 315 aaPredicted RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 P2RY12Q9H244 342 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PPT2Q9UMR5 302 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 PCDHB1Q9Y5F3 818 aa11.12□□□□□ -0.63
TROAP-201ENST00000257909 CFAP20Q9Y6A4 193 aaKnown RBP11.12□□□□□ -0.63
TROAP-201ENST00000257909 MYO16Q9Y6X6 1858 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 DRGXA6NNA5 263 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 IQCF5A8MTL0 148 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 A8MVJ9 347 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 FPGTO14772 594 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 COL6A1P12109 1028 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 EPB42P16452 691 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 MAPKAPK2P49137 400 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 OR6J1Q8NGC5 347 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 WDR36Q8NI36 951 aaKnown RBP11.11□□□□□ -0.63
TROAP-201ENST00000257909 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 BTN2A2Q8WVV5 523 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 REPS1Q96D71 796 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 HHIPQ96QV1 700 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
TROAP-201ENST00000257909 PDFQ9HBH1 243 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 524.6 ms