RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 CD52P31358 61 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 PTPN9P43378 593 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CLCN3P51790 818 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 GK2Q14410 553 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 PUM1Q14671 1186 aaKnown RBP eCLIP7.98□□□□□ -1.13
DSG3-201ENST00000257189 HMGN3Q15651 99 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 SEZ6Q53EL9 994 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 GLT8D1Q68CQ7 371 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 C3orf33Q6P1S2 294 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 GTPBP8Q8N3Z3 284 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF366Q8N895 744 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 OR52J3Q8NH60 311 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF486Q96H40 463 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 EPYCQ99645 322 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 STRADBQ9C0K7 418 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 SOHLH2Q9NX45 425 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 STUB1Q9UNE7 303 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 WASHC1A8K0Z3 465 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 WASH3PC4AMC7 463 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 TSPAN8P19075 237 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 FNTBP49356 437 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 DUSP4Q13115 394 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZACNQ401N2 412 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 APOBEC3HQ6NTF7 200 aaKnown RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 WASH2PQ6VEQ5 465 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 IRF2BP2Q7Z5L9 587 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CLIP4Q8N3C7 705 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 DEDD2Q8WXF8 326 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZBED3Q96IU2 234 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 LURAP1Q96LR2 239 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 MRPL45Q9BRJ2 306 aaKnown RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF436Q9C0F3 470 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 MGAT4CQ9UBM8 478 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 DERAQ9Y315 318 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 MAP4K5Q9Y4K4 846 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 LRRC72A6NJI9 287 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 EFCAB7A8K855 629 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF705FA8MVS1 300 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 F8W036 122 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 NOBOXO60393 691 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CHRNA1P02708 482 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ESR1P03372 595 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF705DP0CH99 300 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZNF705BP0CI00 300 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 RAB3BP20337 219 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 PROZP22891 400 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ACTC1P68032 377 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ACTA1P68133 377 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CD47Q08722 323 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 RFTN1Q14699 578 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 ARL6IP1Q15041 203 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 EOGTQ5NDL2 527 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 RAET1GQ6H3X3 334 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 DCLRE1AQ6PJP8 1040 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CCBE1Q6UXH8 406 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 CYP4X1Q8N118 509 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 BEST3Q8N1M1 668 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 CHCHD4Q8N4Q1 142 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 LRRC58Q96CX6 371 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 SLC45A3Q96JT2 553 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 SDCBP2Q9H190 292 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 OR51V1Q9H2C8 321 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 ZDHHC6Q9H6R6 413 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 RPF2Q9H7B2 306 aaKnown RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 B3GNT3Q9Y2A9 372 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 TCAF1Q9Y4C2 921 aa7.98□□□□□ -1.13
DSG3-201ENST00000257189 COL1A1P02452 1464 aaPredicted RBP7.98□□□□□ -1.13
DSG3-201ENST00000257189 C17orf113A0A1B0GUU1 675 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CASTOR2A6NHX0 329 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 LACTBL1A8MY62 500 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 SLC7A4O43246 635 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 SNAP29O95721 258 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 NDST3O95803 873 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CSTBP04080 98 aaKnown RBP7.97□□□□□ -1.13
DSG3-201ENST00000257189 KLRK1P26718 216 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 PTPN6P29350 595 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 MAN2A2P49641 1150 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 SCARB2Q14108 478 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 ZNF460Q14592 562 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CYP1B1Q16678 543 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 ANKRD22Q5VYY1 191 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 POGLUT1Q8NBL1 392 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CPT1BQ92523 772 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 HNRNPABQ99729 332 aaKnown RBP7.97□□□□□ -1.13
DSG3-201ENST00000257189 MRI1Q9BV20 369 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 DUSP26Q9BV47 211 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
DSG3-201ENST00000257189 SLC29A3Q9BZD2 475 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 PPIL3Q9H2H8 161 aaKnown RBP7.97□□□□□ -1.13
DSG3-201ENST00000257189 FLRT1Q9NZU1 646 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CA5BQ9Y2D0 317 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 TMEM131LA2VDJ0 1609 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 CPSF4LA6NMK7 179 aaKnown RBP7.97□□□□□ -1.13
DSG3-201ENST00000257189 AGPSO00116 658 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 GABRDO14764 452 aa7.97□□□□□ -1.13
DSG3-201ENST00000257189 SGCEO43556 437 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms