RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IGSF10Q6WRI0 2623 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 FASNP49327 2511 aaKnown RBP23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 A0A096LPK6 155 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 FEZF1A0PJY2 475 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 SYCE1LA8MT33 242 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 POC1B-GALNT4F8VUJ3 575 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 KERAO60938 352 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 MED26O95402 600 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 IGHEP01854 428 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 SLC35G6P0C7Q6 338 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 CXCR2P25025 360 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 BCL6P41182 706 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 OCA2Q04671 838 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 DLG1Q12959 904 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 NKG7Q16617 165 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 CATSPEREQ5SY80 951 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 LGSNQ5TDP6 509 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 KLC3Q6P597 504 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 LRRN4CLQ8ND94 238 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 SLC13A3Q8WWT9 602 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 ISL2Q96A47 359 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 NXNL1Q96CM4 212 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 ALG9Q9H6U8 611 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 ZNF282Q9UDV7 671 aaPredicted RBP23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 PTBP2Q9UKA9 531 aaKnown RBP23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 MAU2Q9Y6X3 613 aa23.17■■□□□ 1.3
SDF2L1-201ENST00000248958 EXOC1LA0A1B0GW35 172 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 VSTM2BA6NLU5 285 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 P2RX6O15547 441 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 RIPK2O43353 540 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 OR1F1O43749 312 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 LCMT2O60294 686 aaKnown RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 CNOT3O75175 753 aaKnown RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 H2AFYO75367 372 aaKnown RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 RFPL1O75677 317 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 STK16O75716 305 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 KLHL2O95198 593 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 ALDOAP04075 364 aaKnown RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 FBLP22087 321 aaKnown RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 AHRP35869 848 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 AVPR1BP47901 424 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 RRADP55042 308 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 CDC16Q13042 620 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 PWP1Q13610 501 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 ACAP2Q15057 778 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 MED25Q71SY5 747 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 TMPRSS11BQ86T26 416 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 METTL27Q8N6F8 245 aaPredicted RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 TMEM102Q8N9M5 508 aaPredicted RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 TSNARE1Q96NA8 513 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 ATOH8Q96SQ7 321 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 TMEM79Q9BSE2 394 aa23.16■■□□□ 1.3
SDF2L1-201ENST00000248958 IGLV3-12A0A075B6K2 115 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 H0YIG0 161 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 MKRN2OSH3BPM6 223 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 TAPBPO15533 448 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 ATXN8OSP0DMR3 200 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 TNFRSF8P28908 595 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 OTX2P32243 289 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 REEP5Q00765 189 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 C19orf57Q0VDD7 668 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 DSG2Q14126 1118 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 CENPLQ8N0S6 344 aaPredicted RBP23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 KCTD4Q8WVF5 259 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 MMABQ96EY8 250 aaPredicted RBP23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 VPS50Q96JG6 964 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 SPSB2Q99619 263 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 TXLNGYQ9BZA5 131 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 SEMA4CQ9C0C4 833 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 SLC25A18Q9H1K4 315 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 ACSS2Q9NR19 701 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 DNAJC11Q9NVH1 559 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 ZFP69BQ9UJL9 534 aa23.15■■□□□ 1.3
SDF2L1-201ENST00000248958 PEX12O00623 359 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 CLGNO14967 610 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 FOXS1O43638 330 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 NSA2O95478 260 aaKnown RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 C1GALT1C1LP0DN25 315 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 GDF5P43026 501 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 MAGEA12P43365 314 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 SCTRP47872 440 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 MEF2AQ02078 507 aaPredicted RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 ATG9BQ674R7 924 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 TMEM214Q6NUQ4 689 aaKnown RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 NIPAL1Q6NVV3 410 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 UHMK1Q8TAS1 419 aaKnown RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 DCAKDQ8WVC6 231 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 MIEF2Q96C03 454 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 FER1L6-AS2Q96M78 137 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 PITHD1Q9GZP4 211 aaPredicted RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 ING2Q9H160 280 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 VPS11Q9H270 941 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 EHD1Q9H4M9 534 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 MKKSQ9NPJ1 570 aaPredicted RBP23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 SEMA3GQ9NS98 782 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 C14orf105Q9NVL8 296 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 FETUBQ9UGM5 382 aa23.14■■□□□ 1.29
SDF2L1-201ENST00000248958 MAP4K5Q9Y4K4 846 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms