RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TBC1D25Q3MII6 688 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MINDY4Q4G0A6 757 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 LHFPL3Q86UP9 236 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 YIPF7Q8N8F6 280 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TCF7L1Q9HCS4 588 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SIRPGQ9P1W8 387 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MDC1Q14676 2089 aaKnown RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 ENDOUP21128 410 aaKnown RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 ACVR2AP27037 513 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ARL2P36404 184 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 APLP1P51693 650 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF304Q9HCX3 659 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MARK1Q9P0L2 795 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DRD5P21918 477 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GATMP50440 423 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DAOAP59103 153 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DSG2Q14126 1118 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF404Q494X3 552 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GOLGA7Q7Z5G4 137 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 OR2L2Q8NH16 312 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GRPEL2Q8TAA5 225 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MAN2C1Q9NTJ4 1040 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DMAC2Q9NW81 257 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MYH15Q9Y2K3 1946 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 PLD2O14939 933 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TYROBPO43914 113 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLC10A6Q3KNW5 377 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CCDC28AQ8IWP9 274 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CCDC36Q8IYA8 594 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TAS2R9Q9NYW1 312 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SDHDO14521 159 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 KELP23276 732 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 STOMP27105 288 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CDKN2DP55273 166 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 LMNTD1Q8N9Z9 388 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 AP3M1Q9Y2T2 418 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TMEM98Q9Y2Y6 226 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 FEZF1A0PJY2 475 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 FAM170BA6NMN3 283 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 HAS3O00219 553 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 C6orf47O95873 294 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 S100A2P29034 98 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ACVR1BP36896 505 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ERVK-25P63136 954 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 C1orf94Q6P1W5 598 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SYVN1Q86TM6 617 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 C1orf216Q8TAB5 229 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DEDD2Q8WXF8 326 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF778Q96MU6 729 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ERVK-11Q9UQG0 969 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TMEM131LA2VDJ0 1609 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 M0QX08 132 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 BEX5Q5H9J7 111 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLC22A15Q8IZD6 547 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 FIBCD1Q8N539 461 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ACOT12Q8WYK0 555 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 RIT1Q92963 219 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TMEM106CQ9BVX2 250 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLC39A1Q9NY26 324 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 A0A1W2PRQ8 180 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 RAD1O60671 282 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MMP3P08254 477 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GPR4P46093 362 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 EXOC3L2Q2M3D2 409 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CCBE1Q6UXH8 406 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLITRK4Q8IW52 837 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF471Q9BX82 626 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 C3orf14Q9HBI5 128 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 KCNE2Q9Y6J6 123 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TVP23AA6NH52 213 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GRM5P41594 1212 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLC10A2Q12908 348 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 TXNDC8Q6A555 127 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZFP90Q8TF47 636 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 HDHD5Q9BXW7 423 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF639Q9UID6 485 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SLC33A1O00400 549 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 CDK14O94921 469 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 T-ENOLP0DO92 83 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SSTR2P30874 369 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TLX1P31314 330 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 BMXP51813 675 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SNU13P55769 128 aaKnown RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 TOMM5Q8N4H5 51 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TEFMQ96QE5 360 aaKnown RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 GPR88Q9GZN0 384 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SOWAHBA6NEL2 793 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CDH5P33151 784 aaPredicted RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 FXYD6P3P58550 94 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GRK1Q15835 563 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ZNF311Q5JNZ3 666 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SUSD1Q6UWL2 747 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 RNF175Q8N4F7 328 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 OTUB2Q96DC9 234 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 DHRS1Q96LJ7 313 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 OR2S2Q9NQN1 319 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GPR52Q9Y2T5 361 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 IRAK3Q9Y616 596 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms