RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PIK3CBP42338 1070 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 ADPRHP54922 357 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 MYBPC1Q00872 1141 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 PON2Q15165 354 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 NKG7Q16617 165 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 FAM98BQ52LJ0 330 aaKnown RBP17.78■□□□□ 0.44
HOXC11-201ENST00000243082 TMTC4Q5T4D3 741 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 COMMD6Q7Z4G1 85 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 VN1R5Q7Z5H4 357 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 APLFQ8IW19 511 aaPredicted RBP17.78■□□□□ 0.44
HOXC11-201ENST00000243082 COQ8BQ96D53 544 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 ACAT2Q9BWD1 397 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 LIMD1Q9UGP4 676 aa17.78■□□□□ 0.44
HOXC11-201ENST00000243082 GNG14A0A1W2PPG7 69 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 CLOCKO15516 846 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 CREG1O75629 220 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 RASAL1O95294 804 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 SLC35G4P0C7Q5 338 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 HOXB2P14652 356 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 IGFALSP35858 605 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 CHRNB3Q05901 458 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 MAP7Q14244 749 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 CPTPQ5TA50 214 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 DUS1LQ6P1R4 473 aaKnown RBP17.77■□□□□ 0.44
HOXC11-201ENST00000243082 CARM1Q86X55 608 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 FBXO30Q8TB52 745 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 FAM162AQ96A26 154 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 SH3KBP1Q96B97 665 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 REXO5Q96IC2 774 aaKnown RBP17.77■□□□□ 0.44
HOXC11-201ENST00000243082 UGT2B28Q9BY64 529 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 TRIT1Q9H3H1 467 aaKnown RBP17.77■□□□□ 0.44
HOXC11-201ENST00000243082 NTN4Q9HB63 628 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 DCAF13Q9NV06 445 aaKnown RBP17.77■□□□□ 0.44
HOXC11-201ENST00000243082 ZNF639Q9UID6 485 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 SLC17A4Q9Y2C5 497 aa17.77■□□□□ 0.44
HOXC11-201ENST00000243082 RNF103-CHMP3A0A140T963 221 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 CLIC1O00299 241 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 SAP18O00422 153 aaKnown RBP17.77■□□□□ 0.43
HOXC11-201ENST00000243082 LATO43561 262 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 KLHL18O94889 574 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 PRSS23O95084 383 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 RETP07949 1114 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 HSD17B2P37059 387 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 RNF220Q5VTB9 566 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 TMIGD1Q6UXZ0 262 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF621Q6ZSS3 439 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 HORMAD1Q86X24 394 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 ST13P4Q8IZP2 240 aaPredicted RBP17.77■□□□□ 0.43
HOXC11-201ENST00000243082 WDR48Q8TAF3 677 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 NETO1Q8TDF5 533 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 TFAP2CQ92754 450 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 UBE2E3Q969T4 207 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 INSM2Q96T92 566 aaPredicted RBP17.77■□□□□ 0.43
HOXC11-201ENST00000243082 FBRSQ9HAH7 460 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 TAC3Q9UHF0 121 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 MAPRE3Q9UPY8 281 aa17.77■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3DA0A087WVF3 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3IA0A087WXS9 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3EA0A087X179 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 A0A1W2PPV9 198 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 EVPLLA8MZ36 301 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3LB9A6J9 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 UPK1AO00322 258 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 CPSF4O95639 269 aaKnown RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 GBAP04062 536 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 FAM58BPP0C7Q3 252 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3HP0C7X1 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 ENGP17813 658 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 EFNA1P20827 205 aaPredicted RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 MAT2AP31153 395 aaKnown RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 MLF2Q15773 248 aaPredicted RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3CQ6IPX1 549 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 ISLR2Q6UXK2 745 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 SERPINA11Q86U17 422 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 C17orf64Q86WR6 236 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TBC1D3Q8IZP1 549 aaPredicted RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 METTL4Q8N3J2 472 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 SMRP1Q8NCR6 262 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 TIMM29Q9BSF4 260 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 BTBD1Q9H0C5 482 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 YY1AP1Q9H869 796 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 FZD3Q9NPG1 666 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 C8orf4Q9NR00 106 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 SPATA7Q9P0W8 599 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 BTNL2Q9UIR0 455 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 PLEKHM1Q9Y4G2 1056 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 NUP214P35658 2090 aaPredicted RBP17.76■□□□□ 0.43
HOXC11-201ENST00000243082 PRR19A6NJB7 356 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 EI24O14681 340 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 SMIM18P0DKX4 95 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 GPX2P18283 190 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 HPCAL1P37235 193 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF763Q0D2J5 394 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 IER5LQ5T953 404 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 FOXB2Q5VYV0 432 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms