RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PIKFYVEQ9Y2I7 2098 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 FLNCQ14315 2725 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 FITM1A5D6W6 292 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PRPF4O43172 522 aaKnown RBP eCLIP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SLC28A2O43868 658 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CTSVO60911 334 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SMIM24O75264 130 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 EIF2S1P05198 315 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 GSTA1P08263 222 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 NUDT17P0C025 328 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CDH1P12830 882 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF28P17035 718 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 KRT15P19012 456 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 ALAS2P22557 587 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 GSTM2P28161 218 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 HPDP32754 393 aaPredicted RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SLC6A12P48065 614 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 GLRBP48167 497 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PIK3CGP48736 1102 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SKP1P63208 163 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 DCDP81605 110 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 NFATC3Q12968 1075 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CDC16Q13042 620 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 LAPTM5Q13571 262 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PDK4Q16654 411 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PAGE2BQ5JRK9 111 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 NXPE4Q6UWF7 544 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 TIPARPQ7Z3E1 657 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CROCCP2Q86T23 111 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 DSELQ8IZU8 1212 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 KRT78Q8N1N4 520 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 MREGQ8N565 214 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 TTLQ8NG68 377 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 EXT2Q93063 718 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SEC16BQ96JE7 1060 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 ATOH8Q96SQ7 321 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 SPRTNQ9H040 489 aaPredicted RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 MRPL46Q9H2W6 279 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 EPB41L4BQ9H329 900 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CUTCQ9NTM9 273 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 TBK1Q9UHD2 729 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 DCDC2Q9UHG0 476 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 GPN3Q9UHW5 284 aaPredicted RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PTBP2Q9UKA9 531 aaKnown RBP10.78□□□□□ -0.68
SF3B6-201ENST00000233468 CDC14AQ9UNH5 594 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 PADI2Q9Y2J8 665 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 ANGPTL3Q9Y5C1 460 aa10.78□□□□□ -0.68
SF3B6-201ENST00000233468 IGKV1-8A0A0C4DH67 115 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 A0A1B0GX78 115 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 TRBC2A0A5B9 178 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 HYKKA2RU49 373 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 URADA6NGE7 173 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF891A8MT65 544 aaPredicted RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 H0YGG7 62 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 MAP2K7O14733 419 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 HAT1O14929 419 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 CCNT2O60583 730 aaKnown RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 KATNA1O75449 491 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 RFPL1O75677 317 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 TIAF1O95411 115 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 RECKO95980 971 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 RAB40ALP0C0E4 278 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 SLC35G6P0C7Q6 338 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 WT1P19544 449 aaPredicted RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 TCN2P20062 427 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 TAC1P20366 129 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 GCAP28676 217 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 DLSTP36957 453 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 CCT5P48643 541 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 ALDH18A1P54886 795 aaKnown RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 CSNK1G2P78368 415 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 IRF9Q00978 393 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 DLG1Q12959 904 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 HIST2H2ACQ16777 129 aaPredicted RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 HIST2H2AA3Q6FI13 130 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 NIPAL1Q6NVV3 410 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 PRMT9Q6P2P2 845 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 TTLL10Q6ZVT0 673 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 PRICKLE2Q7Z3G6 844 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 VASH2Q86V25 355 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 SNX31Q8N9S9 440 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 OR4K1Q8NGD4 311 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 UBTD2Q8WUN7 234 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 EXTL1Q92935 676 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 NEIL2Q969S2 332 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 UBE2E3Q969T4 207 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 MVB12AQ96EY5 273 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 SLC45A3Q96JT2 553 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 OR2A5Q96R48 311 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 SARGQ9BW04 601 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 EHD1Q9H4M9 534 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 CLMPQ9H6B4 373 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 PCMTD2Q9NV79 361 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 CUEDC1Q9NWM3 386 aaPredicted RBP10.77□□□□□ -0.69
SF3B6-201ENST00000233468 OPTCQ9UBM4 332 aa10.77□□□□□ -0.69
SF3B6-201ENST00000233468 NDOR1Q9UHB4 597 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms