RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TAOK1Q7L7X3 1001 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 TMPRSS11BQ86T26 416 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 SYVN1Q86TM6 617 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 KLHDC8AQ8IYD2 350 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 ARHGEF39Q8N4T4 335 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 MFSD9Q8NBP5 474 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 PDPRQ8NCN5 879 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 OR4K1Q8NGD4 311 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 UBLCP1Q8WVY7 318 aaPredicted RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 GPR78Q96P69 363 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 PTBP2Q9UKA9 531 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 PTRH2Q9Y3E5 179 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 KCNE2Q9Y6J6 123 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 KCNE1BA0A087WTH5 132 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 A0A0A6YYC8 382 aaPredicted RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 I3L1I5 382 aaPredicted RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 FFAR3O14843 346 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 GPR42O15529 346 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 FOXS1O43638 330 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 OR1F1O43749 312 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 CCNT2O60583 730 aaKnown RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 STK16O75716 305 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 KLF7O75840 302 aaPredicted RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 SHBGP04278 402 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ITGB2P05107 769 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 FAM87AP0C7U9 286 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 MTHFD2P13995 350 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 GRK3P35626 688 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 GGT5P36269 586 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 VSNL1P62760 191 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 REEP5Q00765 189 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 FAM83EQ2M2I3 478 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 CRTC2Q53ET0 693 aaPredicted RBP12.07□□□□□ -0.48
LSM5-201ENST00000223084 CDKL4Q5MAI5 379 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 BORAQ6PGQ7 559 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 OVCH1Q7RTY7 1134 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 PRSS41Q7RTY9 318 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 CCDC91Q7Z6B0 441 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ASPGQ86U10 573 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 TCAIMQ8N3R3 496 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 EXD3Q8N9H8 876 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 SNX31Q8N9S9 440 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 KCT2Q8NC54 265 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ZCCHC10Q8TBK6 192 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 SLC13A3Q8WWT9 602 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ISL2Q96A47 359 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 THAP11Q96EK4 314 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 MOCOSQ96EN8 888 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 SEMA4CQ9C0C4 833 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 PELI2Q9HAT8 420 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 ZNF304Q9HCX3 659 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 CTSFQ9UBX1 484 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 POLHQ9Y253 713 aa12.07□□□□□ -0.48
LSM5-201ENST00000223084 TRBC2A0A5B9 178 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 LRRC14BA6NHZ5 514 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 TXNDC9O14530 226 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 MAP2K7O14733 419 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PRAMEF4O60810 478 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 ZIC2O95409 532 aaPredicted RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 ONECUT2O95948 504 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PRB1P04280 392 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SERPIND1P05546 499 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PIM1P11309 404 aaPredicted RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 CNTFP26441 200 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 OTX2P32243 289 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SCTRP47872 440 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 EMP3P54852 163 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 CDC16Q13042 620 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 ACAP2Q15057 778 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 RBBP5Q15291 538 aaKnown RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 NKG7Q16617 165 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PRAMEF9Q5VWM5 478 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 KLC3Q6P597 504 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SLCO4C1Q6ZQN7 724 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SHISA6Q6ZSJ9 500 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PRSS58Q8IYP2 241 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SHISA5Q8N114 240 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 CAMKVQ8NCB2 501 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 RHEBL1Q8TAI7 183 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 ADAMTS17Q8TE56 1095 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 TM4SF19Q96DZ7 209 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 MMABQ96EY8 250 aaPredicted RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 SCYL1Q96KG9 808 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 C17orf62Q9BQA9 187 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 AIF1LQ9BQI0 150 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 CD244Q9BZW8 370 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SOX17Q9H6I2 414 aaPredicted RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 CNOT10Q9H9A5 744 aaKnown RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 GEMIN8Q9NWZ8 242 aaKnown RBP12.06□□□□□ -0.48
LSM5-201ENST00000223084 MAN2B2Q9Y2E5 1009 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms