RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZNF852Q6ZMS4 543 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 LGI4Q8N135 537 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 KLHL36Q8N4N3 616 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 A0A1W2PQU0 124 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 AGPSO00116 658 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 NOBOXO60393 691 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 ITGA10O75578 1167 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 RBM20Q5T481 1227 aaKnown RBP18.39■□□□□ 0.53
SMPD3-201ENST00000219334 TICAM1Q8IUC6 712 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 PRTFDC1Q9NRG1 225 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 MS4A12Q9NXJ0 267 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 FAM172BPA6NC97 362 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 SEMA3DO95025 777 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 FIP1L1Q6UN15 594 aaKnown RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 DPY19L3Q6ZPD9 716 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 CILP2Q8IUL8 1156 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 SLC2A11Q9BYW1 496 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 RIMKLBQ9ULI2 386 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 STYXL1Q9Y6J8 313 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF432O94892 652 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 SYNGR4O95473 234 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 BMP8BP34820 402 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 VEGFBP49765 207 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 VSX2P58304 361 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 ARSJQ5FYB0 599 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 BMP8AQ7Z5Y6 402 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 C14orf80Q86SX3 495 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF598Q86UK7 904 aaKnown RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 KCNJ9Q92806 393 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 TLCD1Q96CP7 247 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 PRODH2Q9UF12 536 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 OPN1SWP03999 348 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 JUNDP17535 347 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 ETV3P41162 512 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 KIAA1191Q96A73 305 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 PKP4Q99569 1192 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 FAM120CQ9NX05 1096 aaKnown RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 HCN2Q9UL51 889 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 MAFFQ9ULX9 164 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 BACE2Q9Y5Z0 518 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 M0R2N6 131 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 CHP2O43745 196 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 CSTBP04080 98 aaKnown RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 CYP17A1P05093 508 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 HRH2P25021 359 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 ABATP80404 500 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 RUNX3Q13761 415 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 CYP27C1Q4G0S4 372 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 PAMR1Q6UXH9 720 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 STX12Q86Y82 276 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 FOXJ1Q92949 421 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 GLYATL1Q969I3 302 aa18.38■□□□□ 0.53
SMPD3-201ENST00000219334 POLR2J2Q9GZM3 115 aaKnown RBP18.38■□□□□ 0.53
SMPD3-201ENST00000219334 HERC3Q15034 1050 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 TSC22D1Q15714 1073 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 PHF12Q96QT6 1004 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 RBP7Q96R05 134 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 GPR22Q99680 433 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 NSUN3Q9H649 340 aaKnown RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 MRM3Q9HC36 420 aaKnown RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 NFAT5O94916 1531 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 H3BNX3 289 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 RBMS1P29558 406 aaKnown RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 ZMYND11Q15326 602 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 SIAH1Q8IUQ4 282 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 TRAM1L1Q8N609 369 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 PTCHD1Q96NR3 888 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 B3GNT4Q9C0J1 378 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 MAGEE1Q9HCI5 957 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 SYPP08247 313 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 CHRM5P08912 532 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 GSTT2BP0CG30 244 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 DNAJB1P25685 340 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 CAPZA1P52907 286 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 C1orf61Q13536 156 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 ABCA11PQ4W5N1 156 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 OR4K14Q8NGD5 310 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 DNAJA4Q8WW22 397 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 BORCS5Q969J3 196 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 LRRC58Q96CX6 371 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 DEFB126Q9BYW3 111 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 STOML2Q9UJZ1 356 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 AQP12BA6NM10 295 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 H7BY64 318 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 TBX1O43435 398 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 DLX3O60479 287 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 STK19P49842 368 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 SCN1BQ07699 218 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 TNFAIP8L3Q5GJ75 292 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 AQP12AQ8IXF9 295 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 FCGR1BQ92637 280 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 SCAMP4Q969E2 229 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 TEPSINQ96N21 525 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 PRAP1Q96NZ9 151 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 CMKLR1Q99788 373 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 C17orf62Q9BQA9 187 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 CD244Q9BZW8 370 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.37■□□□□ 0.53
SMPD3-201ENST00000219334 PADI2Q9Y2J8 665 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms