RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LOC105369274A0A096LPK9 316 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 LOC102723532A0A0G2JNH3 316 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 TMEM233B4DJY2 109 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 TMX2-CTNND1H3BSU7 103 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 ENO1P06733 434 aaKnown RBP26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 HMOX2P30519 316 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 SCTRP47872 440 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 DDX39BQ13838 428 aaKnown RBP26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 MCATQ8IVS2 390 aaKnown RBP26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 OR4N4Q8N0Y3 316 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 ZNF781Q8N8C0 355 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 MAGEB10Q96LZ2 347 aaPredicted RBP26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 OR2A5Q96R48 311 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 OCIAD1Q9NX40 245 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 ZDHHC2Q9UIJ5 367 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 PCDHGA4Q9Y5G9 962 aa26.07■■□□□ 1.76
CHMP4B-201ENST00000217402 EFCAB7A8K855 629 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 HYAL3O43820 417 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 CTSBP07858 339 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 GABRA4P48169 554 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 RELAQ04206 551 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 FOXM1Q08050 763 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 TUBB3Q13509 450 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SGO1Q5FBB7 561 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 MARCH9Q86YJ5 346 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 MFSD9Q8NBP5 474 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 OR7G3Q8NG95 312 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 UBE2E3Q969T4 207 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 MTFMTQ96DP5 389 aaKnown RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 CMKLR1Q99788 373 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SARGQ9BW04 601 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 PITHD1Q9GZP4 211 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 AKAP7Q9P0M2 348 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 PLCL2Q9UPR0 1127 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 PCDHGA11Q9Y5H2 935 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 TMEM150CB9EJG8 249 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 H0YGG7 62 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 H0YIV9 168 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 EIF2S1P05198 315 aaKnown RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SERPIND1P05546 499 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SERPINB3P29508 390 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 NEK2P51955 445 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 VSX2P58304 361 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 ARF3P61204 181 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 OCRLQ01968 901 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 TARDBPQ13148 414 aaKnown RBP eCLIP26.06■■□□□ 1.762e-6■□□□□ 8.8
CHMP4B-201ENST00000217402 TMPRSS12Q86WS5 348 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 LAS2Q8IYD9 372 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 RERGQ96A58 199 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SLC29A3Q9BZD2 475 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 ILKAPQ9H0C8 392 aaPredicted RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 ELOVL6Q9H5J4 265 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SLCO1B3Q9NPD5 702 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 FGF21Q9NSA1 209 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 IRAK4Q9NWZ3 460 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 SIDT1Q9NXL6 827 aaKnown RBP26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 RAP2CQ9Y3L5 183 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 LOXL2Q9Y4K0 774 aa26.06■■□□□ 1.76
CHMP4B-201ENST00000217402 AZIN1O14977 448 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 FRG2Q64ET8 278 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 FAM47EQ6ZV65 393 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 VN1R4Q7Z5H5 301 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 RNF175Q8N4F7 328 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 CHCHD4Q8N4Q1 142 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 CCT6BQ92526 530 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 REPS1Q96D71 796 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 LIN37Q96GY3 246 aaPredicted RBP26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 FRG2BQ96QU4 278 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 OR6C1Q96RD1 312 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 MTERF1Q99551 399 aaKnown RBP26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 MACROD1Q9BQ69 325 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 NT5DC2Q9H857 520 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 ZFP69BQ9UJL9 534 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 SNX6Q9UNH7 406 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 TRAF6Q9Y4K3 522 aa26.05■■□□□ 1.76
CHMP4B-201ENST00000217402 TCP11X1B4DZS4 312 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 CCL4P13236 92 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 HTR6P50406 440 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 IFT88Q13099 833 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 COL9A2Q14055 689 aaPredicted RBP26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 PUM1Q14671 1186 aaKnown RBP eCLIP26.04■■□□□ 1.761e-7■□□□□ 10.3
CHMP4B-201ENST00000217402 RAB11FIP2Q7L804 512 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 HUS1BQ8NHY5 278 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 HBEGFQ99075 208 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 FANCEQ9HB96 536 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 FARSBQ9NSD9 589 aaKnown RBP26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 STARD5Q9NSY2 213 aa26.04■■□□□ 1.76
CHMP4B-201ENST00000217402 ANKDD1BA6NHY2 528 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 MANBAO00462 879 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 NDUFS4O43181 175 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 SNUPNO95149 360 aaKnown RBP26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 UROSP10746 265 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 AHRP35869 848 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 ACY1Q03154 408 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 KANK2Q63ZY3 851 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 RGS9BPQ6ZS82 235 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 VN1R5Q7Z5H4 357 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 ASPGQ86U10 573 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 WDR20Q8TBZ3 569 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 THAP11Q96EK4 314 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms