RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 H7BY64 318 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NDUFS1P28331 727 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLC19A1P41440 591 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CLDN8P56748 225 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PQLC1Q8N2U9 271 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 MINDY1Q8N5J2 469 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 BHLHE22Q8NFJ8 381 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CADM4Q8NFZ8 388 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRAP1Q96NZ9 151 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ZBTB18Q99592 522 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 HOPXQ9BPY8 73 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GID8Q9NWU2 228 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DLGAP2Q9P1A6 1054 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TMEM181Q9P2C4 612 aa18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 RUVBL1Q9Y265 456 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CD27P26842 260 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PIK3CBP42338 1070 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ATXN3P54252 364 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 AQP4P55087 323 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRDX1Q06830 199 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SF1Q15637 639 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SPANXN4Q5MJ08 99 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLC2A7Q6PXP3 512 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 VN1R5Q7Z5H4 357 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FAM9CQ8IZT9 166 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 C1orf52Q8N6N3 182 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRM3Q9NNZ6 103 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TRBV23OR9-2A0A075B6M9 112 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 IGKV1-8A0A0C4DH67 115 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRICKLE3O43900 615 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 KDM1AO60341 852 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 TCN1P20061 433 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLC6A2P23975 617 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CCR8P51685 355 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 SLC7A2P52569 658 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 RPL6Q02878 288 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NFYCQ13952 458 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CAPRIN1Q14444 709 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 OGFRL1Q5TC84 451 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PARGQ86W56 976 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 DPP10Q8N608 796 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FAM174AQ8TBP5 190 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 JPH3Q8WXH2 748 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 NR1H4Q96RI1 486 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 AIF1LQ9BQI0 150 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PCED1AQ9H1Q7 454 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ABCD2Q9UBJ2 740 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PCDHB11Q9Y5F2 797 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CABIN1Q9Y6J0 2220 aa18.9■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PRORSD1PA6NEY8 169 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TRIM38O00635 465 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TGFB1P01137 390 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PGRP06401 933 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CELA2BP08218 269 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PEBP1P30086 187 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CXCL12P48061 93 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RAE1P78406 368 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SPIN4Q56A73 249 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RIMKLAQ8IXN7 391 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ANKRD53Q8N9V6 530 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GPR156Q8NFN8 814 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CHTF18Q8WVB6 975 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SLC13A3Q8WWT9 602 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CXorf40BQ96DE9 158 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 C6orf203Q9P0P8 240 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MAGEA13PA6NCF6 341 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 K7ESF4 209 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PEX1O43933 1283 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 IL6P05231 212 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PCSK2P16519 638 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CXCR2P25025 360 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MAOBP27338 520 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 FOXM1Q08050 763 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 KIAA2013Q8IYS2 634 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LCN9Q8WX39 176 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TMEM74Q96NL1 305 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GSDMCQ9BYG8 508 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 VCX3BQ9H321 246 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR51B5Q9H339 312 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SPHK1Q9NYA1 384 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TAAR2Q9P1P5 351 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CD300AQ9UGN4 299 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PPT2Q9UMR5 302 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DMDP11532 3685 aa18.89■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TBX6O95947 436 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 WNT1P04628 370 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 UBTFL6P0CB48 400 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SHMT2P34897 504 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 REEP5Q00765 189 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 RBBP5Q15291 538 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR52E8Q6IFG1 317 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 IYDQ6PHW0 289 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ARMCX6Q7L4S7 300 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 AMIGO1Q86WK6 493 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SLC15A3Q8IY34 581 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MFSD2AQ8NA29 543 aa18.88■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR4E2Q8NGC2 313 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms