RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C11orf65Q8NCR3 313 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RPLP0P6Q8NHW5 317 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 CNIH3Q8TBE1 160 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 MAL2Q969L2 176 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RBM4Q9BWF3 364 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 CCDC177Q9NQR7 707 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 FZD4Q9ULV1 537 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 A0A1B0GTW7 788 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 M0QX08 132 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 FBP2O00757 339 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 SOX14O95416 240 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 C8orf89P0DMQ9 161 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 IMPDH2P12268 514 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TIMP2P16035 220 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 HOXC13P31276 330 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RYKP34925 604 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 FEN1P39748 380 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 DPP6P42658 865 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 STT3AP46977 705 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ENTPD1P49961 510 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TRAP1Q12931 704 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 INTS11Q5TA45 600 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 THOC6Q86W42 341 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TMEM145Q8NBT3 493 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 SLC9A6Q92581 669 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TM7SF3Q9NS93 570 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 C5AR2Q9P296 337 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TAC3Q9UHF0 121 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ARID1AO14497 2285 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 FAM92AA1XBS5 289 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 MFN2O95140 757 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 AMD1P17707 334 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 HTR1BP28222 390 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF140P52738 457 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 NKX3-2P78367 333 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ARMC4Q5T2S8 1044 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 SH2D5Q6ZV89 423 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 SVOPQ8N4V2 548 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 GLYATL1Q969I3 302 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RSPRY1Q96DX4 576 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 GPR174Q9BXC1 333 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 EPS8L2Q9H6S3 715 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 AIG1Q9NVV5 245 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ANGPT4Q9Y264 503 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 TRPM6Q9BX84 2022 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF638Q14966 1978 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SPAG17Q6Q759 2223 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 PIPSLA2A3N6 862 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 MYL12BO14950 172 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 APOL3O95236 402 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ADRB3P13945 408 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 BLVRAP53004 296 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 CST6Q15828 149 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 DGUOKQ16854 277 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 GPR33Q49SQ1 333 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TMEM215Q68D42 235 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 OR4E2Q8NGC2 313 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 C12orf43Q96C57 262 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 RSPH9Q9H1X1 276 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 VAPAQ9P0L0 249 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 MRPS7Q9Y2R9 242 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 A0A1B0GTL3 188 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TMEM202A6NGA9 273 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 EPOPA6NHQ4 379 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 MITFO75030 526 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SDC3O75056 442 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ASLP04424 464 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ACRV1P26436 265 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 EEFSECP57772 596 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SFSWAPQ12872 951 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ATAD3BQ5T9A4 648 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 DDI2Q5TDH0 399 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 CLEC14AQ86T13 490 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 GHDCQ8N2G8 530 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TFGQ92734 400 aaPredicted RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 CEP44Q9C0F1 390 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ABCB9Q9NP78 766 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SELENONQ9NZV5 590 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TMCO1Q9UM00 188 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 CLEC4AQ9UMR7 237 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 UNC13CQ8NB66 2214 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SLC22A2O15244 555 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SOCS5O75159 536 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 RAB8AP61006 207 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 NCF4Q15080 339 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 SPANXN2Q5MJ10 180 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 R3HCC1LQ7Z5L2 792 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 MCFD2Q8NI22 146 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 WFIKKN2Q8TEU8 576 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 EZH1Q92800 747 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms