RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 FGF5P12034 268 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 HRH2P25021 359 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 SCTRP47872 440 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 CCNG1P51959 295 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ITGA1P56199 1179 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 DNAJB13P59910 316 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 RPS15AP62244 130 aaKnown RBP9.62□□□□□ -0.87
CD9-201ENST00000009180 CLCQ05315 142 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
CD9-201ENST00000009180 WASHC2DQ5SRD0 308 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 HHATQ5VTY9 493 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 LIPMQ5VYY2 423 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 LETMD1Q6P1Q0 360 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 TMIGD1Q6UXZ0 262 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 FRMD7Q6ZUT3 714 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 SYVN1Q86TM6 617 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ZNF655Q8N720 491 aaPredicted RBP9.62□□□□□ -0.87
CD9-201ENST00000009180 MFSD9Q8NBP5 474 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 NXPE2Q96DL1 559 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 CCDC126Q96EE4 140 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 WDR34Q96EX3 536 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 KCNA7Q96RP8 456 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 CAPS2Q9BXY5 557 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 EHD1Q9H4M9 534 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 FANCEQ9HB96 536 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 TNFRSF12AQ9NP84 129 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ASCL3Q9NQ33 180 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ZNF225Q9UK10 706 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ANGPTL2Q9UKU9 493 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 ZNF490Q9ULM2 529 aaPredicted RBP9.62□□□□□ -0.87
CD9-201ENST00000009180 MRPS2Q9Y399 296 aaKnown RBP9.62□□□□□ -0.87
CD9-201ENST00000009180 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 PCDHGA4Q9Y5G9 962 aa9.62□□□□□ -0.87
CD9-201ENST00000009180 CDRT15L2A8MXV6 281 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZSCAN9O15535 394 aaPredicted RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 ZNF749O43361 778 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 TRIM13O60858 407 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 H2AFYO75367 372 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 SCRG1O75711 98 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 KIAA0754O94854 1291 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 OR4F21O95013 312 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 NTRK1P04629 796 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 CHRNGP07510 517 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 MSL3P1P0C860 447 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 PCNAP12004 261 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 BGNP21810 368 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 SLC5A2P31639 672 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ARRB2P32121 409 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 GRK3P35626 688 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 CASP2P42575 452 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 RAB15P59190 212 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ERVPABLB-1P60509 514 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 LCP2Q13094 533 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 DDX39BQ13838 428 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 RTP5Q14D33 572 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZRSR2Q15696 482 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 CHI3L2Q15782 390 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 TBCCQ15814 346 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 CPSF6Q16630 551 aaKnown RBP eCLIP9.61□□□□□ -0.87
CD9-201ENST00000009180 CFAP157Q5JU67 520 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 TCHHL1Q5QJ38 904 aaPredicted RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 DCAF12Q5T6F0 453 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 C1orf189Q5VU69 101 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 GRHL2Q6ISB3 625 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 METTL2BQ6P1Q9 378 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 CEACAM20Q6UY09 585 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ATG14Q6ZNE5 492 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 VN1R5Q7Z5H4 357 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ASPGQ86U10 573 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZFAND4Q86XD8 727 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 PPP1R3BQ86XI6 285 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 TMEM126BQ8IUX1 230 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 NUDCD3Q8IVD9 361 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 LSMEM2Q8N112 164 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 KRT78Q8N1N4 520 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 METTL27Q8N6F8 245 aaPredicted RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 CSNK1A1LQ8N752 337 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 SLC38A9Q8NBW4 561 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 KCT2Q8NC54 265 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZCCHC10Q8TBK6 192 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 RERGQ96A58 199 aaPredicted RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 C10orf90Q96M02 699 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZNF285Q96NJ3 590 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 SLC46A1Q96NT5 459 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZNF382Q96SR6 550 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 EFCAB11Q9BUY7 163 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 DDA1Q9BW61 102 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ULBP3Q9BZM4 244 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 ZNF395Q9H8N7 513 aaPredicted RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 NKIRAS1Q9NYS0 192 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 DHCR7Q9UBM7 475 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 RUVBL1Q9Y265 456 aaKnown RBP9.61□□□□□ -0.87
CD9-201ENST00000009180 NCOR2Q9Y618 2525 aa9.61□□□□□ -0.87
CD9-201ENST00000009180 CEP295Q9C0D2 2601 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms