RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 SAP25Q8TEE9 199 aa18.32■□□□□ 0.52
IFRD1-201ENST00000005558 HRASLS2Q9NWW9 162 aa18.32■□□□□ 0.52
IFRD1-201ENST00000005558 NOP53Q9NZM5 478 aaKnown RBP18.32■□□□□ 0.52
IFRD1-201ENST00000005558 KLK4Q9Y5K2 254 aa18.32■□□□□ 0.52
IFRD1-201ENST00000005558 TRBC2A0A5B9 178 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 B2RBV5 119 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 CASC3O15234 703 aaKnown RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 DNAJC8O75937 253 aaPredicted RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 TYRP1P17643 537 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 SDC1P18827 310 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 CAPN3P20807 821 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 PTPN4P29074 926 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 EPHA8P29322 1005 aaPredicted RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 SNRPNP63162 240 aaKnown RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 ZIC1Q15915 447 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 LPAL2Q16609 132 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 HIST2H2ACQ16777 129 aaPredicted RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 C14orf28Q4W4Y0 310 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 C6orf132Q5T0Z8 1188 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 C10orf62Q5T681 223 aaPredicted RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 HIST2H2AA3Q6FI13 130 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 BLOC1S3Q6QNY0 202 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 SLC35F3Q8IY50 421 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 KRT78Q8N1N4 520 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 LIX1Q8N485 282 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 OR2I1PQ8NGU4 316 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 REPS1Q96D71 796 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 EGLN2Q96KS0 407 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 APOLD1Q96LR9 279 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 TMEM74Q96NL1 305 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 MS4A8Q9BY19 250 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 PITHD1Q9GZP4 211 aaPredicted RBP18.31■□□□□ 0.52
IFRD1-201ENST00000005558 PILRAQ9UKJ1 303 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 DOLKQ9UPQ8 538 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 RNF215Q9Y6U7 377 aa18.31■□□□□ 0.52
IFRD1-201ENST00000005558 OR2A25A4D2G3 310 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 OR1F1O43749 312 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 THRAP10827 490 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 PVRP15151 417 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CMPK1P30085 196 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 NOXRED1Q6NXP6 359 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 SPESP1Q6UW49 350 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 UBE3DQ7Z6J8 389 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 RETREG3Q86VR2 466 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 GATAD2AQ86YP4 633 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 C1orf52Q8N6N3 182 aaKnown RBP18.3■□□□□ 0.52
IFRD1-201ENST00000005558 WDR48Q8TAF3 677 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 UBE2E3Q969T4 207 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CMTM5Q96DZ9 223 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 FCRL4Q96PJ5 515 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CADM1Q9BY67 442 aaKnown RBP18.3■□□□□ 0.52
IFRD1-201ENST00000005558 ABCG4Q9H172 646 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 ACTR5Q9H9F9 607 aaPredicted RBP18.3■□□□□ 0.52
IFRD1-201ENST00000005558 LHX9Q9NQ69 397 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 SIRT5Q9NXA8 310 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 ZIM2Q9NZV7 527 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 PCDHGA2Q9Y5H1 932 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 LY6G6EA0A0G2JKS1 128 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 SAP18O00422 153 aaKnown RBP18.3■□□□□ 0.52
IFRD1-201ENST00000005558 TRIM38O00635 465 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CTSVO60911 334 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 MAGP20916 626 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CXCR2P25025 360 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CYP4F2P78329 520 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 CYLC2Q14093 348 aaPredicted RBP18.3■□□□□ 0.52
IFRD1-201ENST00000005558 DUOXA1Q1HG43 343 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 KRTCAP2Q8N6L1 136 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 RCN3Q96D15 328 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 MACROD1Q9BQ69 325 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 U3KQA8 63 aa18.3■□□□□ 0.52
IFRD1-201ENST00000005558 GSAPA4D1B5 854 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 LILRA5A6NI73 299 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 C4orf51C9J302 202 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 ACPPP15309 386 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 ITGAXP20702 1163 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 HOXD12P35452 270 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 CORO7P57737 925 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 IRX1P78414 480 aaPredicted RBP18.29■□□□□ 0.52
IFRD1-201ENST00000005558 SLC25A3Q00325 362 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 SLC5A12Q1EHB4 618 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 GALNT18Q6P9A2 607 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 SLC23A3Q6PIS1 610 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 VN1R4Q7Z5H5 301 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 RIMKLAQ8IXN7 391 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 CLHC1Q8NHS4 586 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.29■□□□□ 0.523e-7■■■□□ 15.7
IFRD1-201ENST00000005558 SLC22A18Q96BI1 424 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 F2RL3Q96RI0 385 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 NPAS2Q99743 824 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 BTBD10Q9BSF8 475 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 RTKNQ9BST9 563 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 SORBS1Q9BX66 1292 aaKnown RBP18.29■□□□□ 0.52
IFRD1-201ENST00000005558 EBPLQ9BY08 206 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 KLHL25Q9H0H3 589 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 MAP10Q9P2G4 905 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 SNX7Q9UNH6 387 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 EXO1Q9UQ84 846 aaKnown RBP18.29■□□□□ 0.52
IFRD1-201ENST00000005558 RRP15Q9Y3B9 282 aaKnown RBP18.29■□□□□ 0.52
IFRD1-201ENST00000005558 PCDHGA4Q9Y5G9 962 aa18.29■□□□□ 0.52
IFRD1-201ENST00000005558 ENTPD2Q9Y5L3 495 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms