RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 NoboxQ8VIH1 527 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gtf2e2Q9D902 292 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ilf3Q9Z1X4 898 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Col3a1P08121 1464 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm7951E9Q0A2 213 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm6482F6YHC1 213 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm17124F6ZIG1 213 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm8871F7AXK2 190 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tfap2aP34056 437 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Arf5P84084 180 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rps3aP97351 264 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lmf1Q3U3R4 574 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rsrp1Q3UC65 298 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 D13Ertd608eQ3UPR8 151 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cdk6Q64261 326 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gba2Q69ZF3 918 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gpr142Q7TQN9 365 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1036Q7TR85 310 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Supv3l1Q80YD1 779 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmem72Q8C3K5 275 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Wdr26Q8C6G8 641 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Galnt13Q8CF93 556 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmem185bQ8R3R5 350 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dio3Q91ZI8 304 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 EtfaQ99LC5 333 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 2200002D01RikQ9D809 114 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rgs17Q9QZB0 210 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Itsn1Q9Z0R4 1714 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp2b13A6H6J2 491 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 NoctO35710 429 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Klrb1bP27812 223 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Klrb1cP27814 223 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 FauP35545 74 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pim3P58750 326 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Entpd7Q3TCT4 606 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Sema3gQ4LFA9 780 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Scn4bQ7M729 228 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc16a9Q7TM99 508 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr853Q8VGG6 305 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Neurl2Q9D0S4 285 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Syt5Q9R0N5 386 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r-ps130A0A140T8U3 855 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Usp51B1AY15 661 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Otud4B2RRE7 1107 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 UbqlnlQ14DL0 610 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gtpbp2Q3UJK4 602 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Itga3Q62470 1053 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lingo3Q6GQU6 589 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc39a10Q6P5F6 833 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fmo9Q8C116 539 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PigwQ8C398 503 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tcf25Q8R3L2 676 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pcdha2Q91Y17 948 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 St3gal4Q91Y74 333 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmem138Q9D6G5 162 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 FancgQ9EQR6 623 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Grb14Q9JLM9 538 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Chd4Q6PDQ2 1915 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1023A2ASU6 311 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fignl2J3QK54 644 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Itgb1P09055 798 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ctbp2P56546 445 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Serpinf1P97298 417 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Klrg2Q3UM83 387 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rbbp4Q60972 425 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr735Q7TRM4 354 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fam76bQ80XP8 339 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nceh1Q8BLF1 408 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PxkQ8BX57 582 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc29a4Q8R139 528 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mrgpra1Q91WW5 304 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Q9DAY5 185 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Psma6Q9QUM9 246 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 MthfrQ9WU20 654 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 ApipQ9WVQ5 241 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc23a1Q9Z2J0 605 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 MycsQ9Z304 431 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cd300ld2A2A7W0 305 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm21904A8HG57 180 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm4846B2RWH8 538 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm21866J3QMH4 180 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ddx4Q61496 702 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 MfrpQ8K480 584 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Med28Q920D3 178 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cst9Q9Z0H6 137 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp2b19O55071 492 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp1a1P00184 524 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ctla2bP12400 113 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc1a5P51912 553 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 StradaQ3UUJ4 431 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Npr2Q6VVW5 1047 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 CptpQ8BS40 216 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Uts2rQ8VIH9 385 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4f15Q99N18 534 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cops7aQ9CZ04 275 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 B4galt4Q9JJ04 344 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zfp949E9Q732 603 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cops5O35864 334 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tnfaip1O70479 316 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gnao1P18872 354 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms