RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 GabarapQ9DCD6 117 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Skp2Q9Z0Z3 424 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Stau1Q9Z108 487 aaKnown RBP15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cldn7Q9Z261 211 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Trim12cD3Z3L3 497 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm5415E9PXF3 478 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Asna1O54984 348 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Nfkb1P25799 971 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Htr1bP28334 386 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 HccsP53702 272 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 FhP97807 507 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmem184cQ3TPR7 525 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fstl1Q62356 306 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Sdr16c5Q7TQA3 309 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rap2aQ80ZJ1 183 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Bend7Q8BSV3 434 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Mpp7Q8BVD5 576 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Q8BWQ6 963 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 BpifcQ8C186 509 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Oas1gQ8K469 367 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc2a10Q8VHD6 536 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Pcdhb19Q91Y01 801 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Dsn1Q9CYC5 348 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tcf7l1Q9Z1J1 584 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cep290Q6A078 2472 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Atg2aQ6P4T0 1914 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmem236A2ARJ3 344 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm10639E9Q6L7 222 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kcnj1O88335 372 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tp63O88898 680 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cct7P80313 544 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kcna7Q17ST2 489 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Pdss2Q33DR3 401 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Armc5Q5EBP3 926 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Prkd1Q62101 918 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc39a10Q6P5F6 833 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arel1Q8CHG5 823 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vmn1r24Q8R2D6 296 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rbms2Q8VC70 383 aaKnown RBP15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Recql5Q8VID5 982 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ppp2r2dQ925E7 453 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tex46Q9CPU3 165 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Timm50Q9D880 353 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Serpini2Q9JK88 405 aa15.72■□□□□ 0.11
Trim28-201ENSMUST00000005705 Zfp626A0A0U1RQ84 676 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Pdzd8B9EJ80 1147 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arfip1G5E8V9 373 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm3248K7N721 186 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cbx4O55187 551 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 P01807 119 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gsta2P10648 222 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Nudt1P53368 156 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Atxn1P54254 791 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 SmoP56726 793 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ermp1Q3UVK0 898 aaKnown RBP15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 RasefQ5RI75 627 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ptx4Q6RUU0 478 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ube2r2Q6ZWZ2 238 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Krr1Q8BGA5 380 aaKnown RBP15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Sit1Q8C503 180 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Oas1hQ8VI97 369 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Nipal2Q91WC7 383 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Qrsl1Q9CZN8 525 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kat8Q9D1P2 458 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 CenpkQ9ESN5 271 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Foxe3Q9QY14 288 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cd300ld2A2A7W0 305 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm13088A2AGW6 460 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Smim18J3QNP2 93 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 PfklP12382 780 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cd247P24161 164 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc6a11P31650 627 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rpl10lP86048 214 aaKnown RBP15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gpat2Q14DK4 801 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Foxk2Q3UCQ1 651 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tapt1Q4VBD2 564 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm2aQ60648 193 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fam131aQ8BWU3 361 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ifnl3Q8CGK6 193 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ly6g5cQ8K1T5 149 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gtf2h3Q8VD76 309 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 TraipQ8VIG6 470 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Marc1Q9CW42 340 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Phf10Q9D8M7 497 aa15.71■□□□□ 0.11
Trim28-201ENSMUST00000005705 Frem2Q6NVD0 3160 aa15.71■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr564E9PWA8 316 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Prpmp5E9PXN1 296 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr1121L7MTT1 314 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rgs4O08899 205 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Foxd2O35392 492 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Ifngr1P15261 477 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Dab1P97318 588 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Polr2cP97760 275 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 VldlrP98156 873 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Samd12Q0VE29 161 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 AptxQ7TQC5 342 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Nrde2Q80XC6 1172 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Atl1Q8BH66 558 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 QpctlQ8BH73 383 aa15.7■□□□□ 0.1
Trim28-201ENSMUST00000005705 Guf1Q8C3X4 651 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms