RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RFXANKO14593 260 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 TSPAN9O75954 239 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ENPP1P22413 925 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 GRK4P32298 578 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 RGRP47804 291 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 LHX1P48742 406 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 PRKCDQ05655 676 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 DBPQ10586 325 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ARHGEF7Q14155 803 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF79Q15937 498 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 USP39Q53GS9 565 aaKnown RBP13.33□□□□□ -0.28
SCARB2-227ENST00000640957 UBXN11Q5T124 520 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 GLT6D1Q7Z4J2 308 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 FAM109AQ8N4B1 249 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 LINC01465Q8N7H1 131 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 FLCNQ8NFG4 579 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 OR8J3Q8NGG0 315 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 NELL1Q92832 810 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 IGSF8Q969P0 613 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 RNF170Q96K19 258 aa13.33□□□□□ -0.28
SCARB2-227ENST00000640957 A0A1W2PQH9 124 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 LOC730098B7Z3J9 87 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 PSIP1O75475 530 aaKnown RBP13.32□□□□□ -0.28
SCARB2-227ENST00000640957 PEX11BO96011 259 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 BCKDHAP12694 445 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 DNAJB2P25686 324 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 CDH12P55289 794 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 TSPYL5Q86VY4 417 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-227ENST00000640957 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 PHF21AQ96BD5 680 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 APOLD1Q96LR9 279 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 RPRD1AQ96P16 312 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-227ENST00000640957 ADAM2Q99965 735 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 OSER1Q9NX31 292 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 SATB2Q9UPW6 733 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 POLHQ9Y253 713 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 DERAQ9Y315 318 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-227ENST00000640957 DOCK1Q14185 1865 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 ULK1O75385 1050 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 OR2B3O76000 313 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 SOX14O95416 240 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
SCARB2-227ENST00000640957 POU4F3Q15319 338 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 LEXMQ3ZCV2 418 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 SLC34A3Q8N130 599 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 RHEBL1Q8TAI7 183 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 ARRDC2Q8TBH0 407 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 ASB15Q8WXK1 588 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 KCTD13Q8WZ19 329 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 MTERF3Q96E29 417 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 C11orf16Q9NQ32 467 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 SPASTQ9UBP0 616 aa13.32□□□□□ -0.28
SCARB2-227ENST00000640957 LCHNA4D1U4 455 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FAM25AB3EWG3 89 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FAM25CB3EWG5 89 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FAM25GB3EWG6 89 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 IRAK2O43187 625 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DNAJB5O75953 348 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TSPAN19P0C672 248 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ITGAMP11215 1152 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ENGP17813 658 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MC4RP32245 332 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MAPK12P53778 367 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 KIAA0040Q15053 153 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ZMYND11Q15326 602 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 NFE2Q16621 373 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 RFX4Q33E94 735 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ARMC12Q5T9G4 340 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 B3GLCTQ6Y288 498 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 CCDC190Q86UF4 302 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DENND1CQ8IV53 801 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 RTL3Q8N8U3 475 aaKnown RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 OR6K2Q8NGY2 324 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ENKURQ8TC29 256 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 PANX1Q96RD7 426 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 LRTM1Q9HBL6 345 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 LATS2Q9NRM7 1088 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MKLN1Q9UL63 735 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 VPS26AO75436 327 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TSPAN12O95859 305 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 RPS3P23396 243 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■■■ 29.8
SCARB2-227ENST00000640957 PTGS2P35354 604 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DDOSTP39656 456 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 KIR2DL3P43628 341 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 CPT1AP50416 773 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 CRYBB1P53674 252 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 PDZK1Q5T2W1 519 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 C10orf62Q5T681 223 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 LIPKQ5VXJ0 399 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms