RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 LCTLQ6UWM7 567 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 ARHGEF39Q8N4T4 335 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 Q8NA96 180 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 GALNT11Q8NCW6 608 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 OR11G2Q8NGC1 345 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 ALKBH8Q96BT7 664 aaKnown RBP23.97■■□□□ 1.43
VEGFA-232ENST00000640653 OLFM1Q99784 485 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 SGPP1Q9BX95 441 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 MKKSQ9NPJ1 570 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-232ENST00000640653 ASH1LQ9NR48 2969 aaKnown RBP23.97■■□□□ 1.43
VEGFA-232ENST00000640653 ARL15Q9NXU5 204 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 LUZP4Q9P127 313 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 B3GNT3Q9Y2A9 372 aa23.97■■□□□ 1.43
VEGFA-232ENST00000640653 NUP210LQ5VU65 1888 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 KCNE1BA0A087WTH5 132 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 E7ESA3 106 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 FANCGO15287 622 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 TP73O15350 636 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 P2RX6O15547 441 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 ALOX12BO75342 701 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 UBAP2LQ14157 1087 aaKnown RBP23.96■■□□□ 1.43
VEGFA-232ENST00000640653 INPP5JQ15735 1006 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-232ENST00000640653 CAPN13Q6MZZ7 669 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-232ENST00000640653 SLC26A11Q86WA9 606 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 ZADH2Q8N4Q0 377 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 HAUS8Q9BT25 410 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 NSMCE4AQ9NXX6 385 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 ANKRD12Q6UB98 2062 aa23.96■■□□□ 1.43
VEGFA-232ENST00000640653 A0A0A6YYC8 382 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 FAM187AA6NFU0 413 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 I3L1I5 382 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 FOXS1O43638 330 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 HPP00738 406 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 ENO2P09104 434 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 GRK3P35626 688 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 AVPR1BP47901 424 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 EMP2P54851 167 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 CSNK1G2P78368 415 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 CALCOCO2Q13137 446 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 FASTKD3Q14CZ7 662 aaKnown RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 AGAP7PQ5VUJ5 663 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 DUPD1Q68J44 220 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 STRA8Q7Z7C7 330 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 PARP9Q8IXQ6 854 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 ZBED8Q8IZ13 594 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 AMER3Q8N944 861 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 ATL1Q8WXF7 558 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 PDLIM5Q96HC4 596 aaKnown RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 AGAP4Q96P64 663 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 TGIF2Q9GZN2 237 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 LHPPQ9H008 270 aa23.95■■□□□ 1.42
VEGFA-232ENST00000640653 ILKAPQ9H0C8 392 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-232ENST00000640653 IDSB3KWA1 339 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 PCDH17O14917 1159 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 HEXBP07686 556 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 CXCR2P25025 360 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 PGGT1BP53609 377 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 CBLBQ13191 982 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 ATG9BQ674R7 924 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 VN1R4Q7Z5H5 301 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 IQCKQ8N0W5 287 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 CAMKVQ8NCB2 501 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 FAM129AQ9BZQ8 928 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 MOCS1Q9NZB8 636 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 MAP10Q9P2G4 905 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 SH2B3Q9UQQ2 575 aa23.94■■□□□ 1.42
VEGFA-232ENST00000640653 HEATR5BQ9P2D3 2071 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 H0YIG0 161 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 CDH1P12830 882 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 SAT1P21673 171 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 ILF2Q12905 390 aaKnown RBP23.93■■□□□ 1.42
VEGFA-232ENST00000640653 PLEKHN1Q494U1 663 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-232ENST00000640653 LAPTM4BQ86VI4 370 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 ZC3HC1Q86WB0 502 aaKnown RBP23.93■■□□□ 1.42
VEGFA-232ENST00000640653 FAM26EQ8N5C1 309 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 SPATA4Q8NEY3 305 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 OR56A3Q8NH54 315 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 FBXL8Q96CD0 374 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 THOC3Q96J01 351 aaKnown RBP23.93■■□□□ 1.42
VEGFA-232ENST00000640653 ERP44Q9BS26 406 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 SLC29A3Q9BZD2 475 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 WHRNQ9P202 907 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 PSAT1Q9Y617 370 aa23.93■■□□□ 1.42
VEGFA-232ENST00000640653 FAM95CA0A1B0GW59 222 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 FEZF1A0PJY2 475 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 CLEC18AA5D8T8 446 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 FFAR3O14843 346 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 GPR42O15529 346 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 STATHP02808 62 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 NPPBP16860 134 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 ZNF37AP17032 561 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-232ENST00000640653 CASQ1P31415 396 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 MRPS25P82663 173 aaKnown RBP23.92■■□□□ 1.42
VEGFA-232ENST00000640653 PRR30Q53SZ7 412 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-232ENST00000640653 CLEC18BQ6UXF7 455 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 NKAPQ8N5F7 415 aaKnown RBP23.92■■□□□ 1.42
VEGFA-232ENST00000640653 CLEC18CQ8NCF0 446 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 PYROXD1Q8WU10 500 aa23.92■■□□□ 1.42
VEGFA-232ENST00000640653 PYCR2Q96C36 320 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms