RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 PRKG1Q13976 671 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 HERC3Q15034 1050 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PTPN14Q15678 1187 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 MLF2Q15773 248 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 AP5B1Q2VPB7 878 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 KRTAP13-4Q3LI77 160 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ARL13AQ5H913 290 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 METTL11BQ5VVY1 283 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TYW3Q6IPR3 259 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 VITQ6UXI7 678 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 C17orf64Q86WR6 236 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LRRC49Q8IUZ0 686 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LACC1Q8IV20 430 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CNGA4Q8IV77 575 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 UBQLNLQ8IYU4 475 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF491Q8N8L2 437 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OR13A1Q8NGR1 328 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 METTL6Q8TCB7 284 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SLC38A5Q8WUX1 472 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ITLN1Q8WWA0 313 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PIK3R3Q92569 461 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 USP6NLQ92738 828 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ORAI1Q96D31 301 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 COG8Q96MW5 612 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RPS6KC1Q96S38 1066 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TSG101Q99816 390 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 DPAGT1Q9H3H5 408 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RETREG1Q9H6L5 497 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 GSN-AS1Q9NRJ2 163 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 B3GAT1Q9P2W7 334 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PEMTQ9UBM1 199 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SLC6A5Q9Y345 797 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 FOXI3A8MTJ6 420 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF724A8MTY0 619 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OGG1O15527 345 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PLPP2O43688 288 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SAP30O75446 220 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 C22orf31O95567 290 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 YES1P07947 543 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ACP1P24666 158 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 DUTP33316 252 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PMELP40967 661 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CTCFP49711 727 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 VCPP55072 806 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TMEM115Q12893 351 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SPATA1Q5VX52 437 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 KIF6Q6ZMV9 814 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SLC16A9Q7RTY1 509 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PRUNE1Q86TP1 453 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RTN4RL2Q86UN3 420 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 FAM131BQ86XD5 332 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF595Q8IYB9 648 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SLC34A3Q8N130 599 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CCDC185Q8N715 623 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 GVQW1Q8N7I0 195 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OR6J1Q8NGC5 347 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OR14L1PQ8NHC6 308 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF564Q8TBZ8 553 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 FNDC8Q8TC99 324 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SPPL2AQ8TCT8 520 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 HM13Q8TCT9 377 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 PDLIM5Q96HC4 596 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RADILQ96JH8 1075 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF285Q96NJ3 590 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 BARD1Q99728 777 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 MAK16Q9BXY0 300 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TRIM9Q9C026 710 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 DNAJC4Q9NNZ3 241 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SLCO1C1Q9NYB5 712 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TAAR2Q9P1P5 351 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LARSQ9P2J5 1176 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ANKMY1Q9P2S6 941 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 DBNLQ9UJU6 430 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CMAHPQ9Y471 501 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 MAP1AP78559 2803 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 COL7A1Q02388 2944 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 IGHV3OR16-12A0A075B7B8 117 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 GALR3O60755 368 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CHRNA1P02708 482 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 H1F0P07305 194 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TRIM49P0CI25 452 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 TRIM49CP0CI26 452 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LGALS3P17931 250 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 GLRA1P23415 457 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZBTB25P24278 435 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OR1D2P34982 312 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 SOX3P41225 446 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 CASP6P55212 293 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RNASELQ05823 741 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 FOXM1Q08050 763 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LETM2Q2VYF4 491 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 RUNDC3AQ59EK9 446 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZNF525Q8N782 197 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ATG16L2Q8NAA4 619 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 OR13F1Q8NGS4 319 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ZPLD1Q8TCW7 415 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 GTF3C6Q969F1 213 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 LRRC58Q96CX6 371 aa-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 ALKBH3Q96Q83 286 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-215ENST00000639629 USP28Q96RU2 1077 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms