RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DNM1LO00429 736 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 PLATP00750 562 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 POU4F2Q12837 409 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 BEST4Q8NFU0 473 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 PEX13Q92968 403 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 RRNAD1Q96FB5 475 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 FAM86C1Q9NVL1 165 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 SPTBN2O15020 2390 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 BBS12Q6ZW61 710 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 FAM46DQ8NEK8 389 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 SLCO1B3Q9NPD5 702 aa18.87■□□□□ 0.61
CACNA1A-257ENST00000638009 LACTBL1A8MY62 500 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 MUSKO15146 869 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PLEKHG7Q6ZR37 379 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CEP68Q76N32 757 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 FRZBQ92765 325 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TMEM80Q96HE8 168 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TMEM134Q9H6X4 195 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TMEM39AQ9NV64 488 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CAMLGP49069 296 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 SH3RF1Q7Z6J0 888 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 RDH10Q8IZV5 341 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TM9SF4Q92544 642 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 DGAT2Q96PD7 388 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 LRRC72A6NJI9 287 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 SHBGP04278 402 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 APODP05090 189 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PRPS1L1P21108 318 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 NDUFS1P28331 727 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF41P51814 821 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 EEF1A1P68104 462 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 MELKQ14680 651 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF674Q2M3X9 581 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 C10orf62Q5T681 223 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 EEF1A1P5Q5VTE0 462 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CACUL1Q86Y37 369 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TDP1Q9NUW8 608 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 KIF25Q9UIL4 384 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 FBXL3Q9UKT7 428 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 ACSL5Q9ULC5 683 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PTPRJQ12913 1337 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PRKCIP41743 596 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CTBP1Q13363 440 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 SPIN2AQ99865 258 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 SPIN2BQ9BPZ2 258 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 ITM2CQ9NQX7 267 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TMLHEQ9NVH6 421 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 RBBP9O75884 186 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 BMP6P22004 513 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 AQP4P55087 323 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 MLLT1Q03111 559 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PTPRRQ15256 657 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 MECRQ9BV79 373 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 LOC100130705A0A1B0GUX0 176 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PRKYO43930 277 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 MAOAP21397 527 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 SLC2A5P22732 501 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 TAS2R20P59543 309 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 FBXO16Q8IX29 292 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 HIPK2Q9H2X6 1198 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 VNN3Q9NY84 501 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 OR1F1O43749 312 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CLCN2P51788 898 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 OR2T5Q6IEZ7 315 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 OR2T29Q8NH02 315 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 LCN9Q8WX39 176 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 OR4K3Q96R72 315 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 AGO3Q9H9G7 860 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 CYP8B1Q9UNU6 501 aa18.86■□□□□ 0.61
CACNA1A-257ENST00000638009 PEX2P28328 305 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 MSI2Q96DH6 328 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 TGM7Q96PF1 710 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 PLA2R1Q13018 1463 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF705FA8MVS1 300 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 PQBP1O60828 265 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF705DP0CH99 300 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF705BP0CI00 300 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 IL1R1P14778 569 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 THBS2P35442 1172 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 THBS3P49746 956 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 DEFB129Q9H1M3 183 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 TP53TG5Q9Y2B4 290 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 EFCAB7A8K855 629 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 UCHL1P09936 223 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 NPTX1Q15818 432 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 MEDAGQ5VYS4 303 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 FOXM1Q08050 763 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ECH1Q13011 328 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 RIN1Q13671 783 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 TMEM203Q969S6 136 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 ZNF419Q96HQ0 510 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 HYLS1Q96M11 299 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 TMEM209Q96SK2 561 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 PPP4R1LQ9P1A2 415 aa18.85■□□□□ 0.61
CACNA1A-257ENST00000638009 A0A0G2JN53 185 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms