RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CRB3Q9BUF7 120 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 SEMA3GQ9NS98 782 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 TENM4Q6N022 2769 aa13.15□□□□□ -0.31
PNKP-228ENST00000637325 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 STATHP02808 62 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 ALPPP05187 535 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 ENO2P09104 434 aaPredicted RBP13.14□□□□□ -0.31
PNKP-228ENST00000637325 ZGLP1P0C6A0 271 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 AVPR1BP47901 424 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 CBLBQ13191 982 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 VWA5B1Q5TIE3 1220 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 CCDC25Q86WR0 208 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 HPS6Q86YV9 775 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 TMEM151BQ8IW70 566 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 GALNT16Q8N428 558 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 FBXL8Q96CD0 374 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 PDLIM5Q96HC4 596 aaKnown RBP13.14□□□□□ -0.31
PNKP-228ENST00000637325 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 DRC3Q9H069 523 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 RHOJQ9H4E5 214 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 TRPC4Q9UBN4 977 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 FBXL4Q9UKA2 621 aa13.14□□□□□ -0.31
PNKP-228ENST00000637325 PRRC2CQ9Y520 2896 aaKnown RBP13.14□□□□□ -0.31
PNKP-228ENST00000637325 SVILO95425 2214 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 SHANK1Q9Y566 2161 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 A0A0A6YYC8 382 aaPredicted RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 I3L1I5 382 aaPredicted RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 P2RX6O15547 441 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 GSTA2P09210 222 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 CDH1P12830 882 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 NPPBP16860 134 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 ZNF37AP17032 561 aaPredicted RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 ITGA3P26006 1051 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 CCR8P51685 355 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 MLLT10P55197 1068 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TAS2R39P59534 338 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 CSNK1G2P78368 415 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 KLC1Q07866 573 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 AIMP2Q13155 320 aaKnown RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 DSG2Q14126 1118 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 FAM53BQ14153 422 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 ZNF460Q14592 562 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 MYBPC3Q14896 1274 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 NADK2Q4G0N4 442 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 VWA2Q5GFL6 755 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TMEM207Q6UWW9 146 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 FRA10AC1Q70Z53 315 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TBC1D19Q8N5T2 526 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 CAMKVQ8NCB2 501 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 PYCR2Q96C36 320 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 TSPAN17Q96FV3 270 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 C16orf45Q96MC5 204 aaPredicted RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 SMAD5Q99717 465 aaKnown RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 SYNPO2LQ9H987 977 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 GPAMQ9HCL2 828 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 C3orf18Q9UK00 162 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 NOVA2Q9UNW9 492 aaKnown RBP13.13□□□□□ -0.31
PNKP-228ENST00000637325 SH2B3Q9UQQ2 575 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 DYRK1BQ9Y463 629 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
PNKP-228ENST00000637325 KCNE1BA0A087WTH5 132 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 NPEPPSL1A6NEC2 478 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 MASP2O00187 686 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 CDC7O00311 574 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 SOCS6O14544 535 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 MAP2K7O14733 419 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 FFAR3O14843 346 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 GPR42O15529 346 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 PIAS1O75925 651 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
PNKP-228ENST00000637325 HEXBP07686 556 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 CXCR2P25025 360 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 EMP2P54851 167 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 POU4F1Q01851 419 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 KIRREL2Q6UWL6 708 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 SBSNQ6UWP8 590 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
PNKP-228ENST00000637325 ASPGQ86U10 573 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 CTAGE3PQ8IX95 158 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 OR56A3Q8NH54 315 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 ANKRD7Q92527 254 aa13.12□□□□□ -0.31
PNKP-228ENST00000637325 TM9SF4Q92544 642 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms