RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TMEM150CB9EJG8 249 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 TRIM13O60858 407 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 H2AFYO75367 372 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 SUPT7LO94864 414 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 BPGMP07738 259 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 DHRS4L1P0CG22 281 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 VARSP26640 1264 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 GRK3P35626 688 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 SERPINB4P48594 390 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 MAPK10P53779 464 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 NAGLUP54802 743 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 RAB15P59190 212 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 RPS15AP62244 130 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 MEF2AQ02078 507 aaPredicted RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 CLCQ05315 142 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 CYP4F3Q08477 520 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 ASPHQ12797 758 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 CHIT1Q13231 466 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 E2F2Q14209 437 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 IL11RAQ14626 422 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 XKR6Q5GH73 641 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 TBC1D19Q8N5T2 526 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 ZNF740Q8NDX6 193 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 OR8K5Q8NH50 307 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 PTCD3Q96EY7 689 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 FCRL4Q96PJ5 515 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 TAAR9Q96RI9 348 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 SELENOSQ9BQE4 189 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 EFCAB11Q9BUY7 163 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 SARGQ9BW04 601 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 NOL11Q9H8H0 719 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 ACSS2Q9NR19 701 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 GEMIN8Q9NWZ8 242 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 RARRES3Q9UL19 164 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 MSRB2Q9Y3D2 182 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 MDC1Q14676 2089 aaKnown RBP15.32■□□□□ 0.04
CLN6-216ENST00000636876 FEZF1A0PJY2 475 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 OR7A17O14581 309 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 POLR1CO15160 346 aaPredicted RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 BIRC5O15392 142 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 LCMT2O60294 686 aaKnown RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 WFS1O76024 890 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 TNFSF15O95150 251 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 FGF5P12034 268 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 CD22P20273 847 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 BCL6P41182 706 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 CCNG1P51959 295 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 CDH13P55290 713 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 ITGA1P56199 1179 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 NAA20P61599 178 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 SLBPQ14493 270 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLN6-216ENST00000636876 RTP5Q14D33 572 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 RBBP7Q16576 425 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 CFAP157Q5JU67 520 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 FRMPD2BQ6IN97 320 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 CEACAM20Q6UY09 585 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 BPHLQ86WA6 291 aaPredicted RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 KRT78Q8N1N4 520 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 OR1L3Q8NH93 324 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 SREK1Q8WXA9 508 aaKnown RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 ATP6V1E2Q96A05 226 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 THAP11Q96EK4 314 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 ZNF285Q96NJ3 590 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 OR2A5Q96R48 311 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 NTMT1Q9BV86 223 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 DDA1Q9BW61 102 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 GATA5Q9BWX5 397 aaPredicted RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 PITHD1Q9GZP4 211 aaPredicted RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 GSTO2Q9H4Y5 243 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 ACTR8Q9H981 624 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 SYNPO2LQ9H987 977 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 SEMA4BQ9NPR2 832 aaPredicted RBP15.31■□□□□ 0.04
CLN6-216ENST00000636876 NKIRAS1Q9NYS0 192 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 SERTAD3Q9UJW9 196 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 ANGPTL2Q9UKU9 493 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 PCDHGA4Q9Y5G9 962 aa15.31■□□□□ 0.04
CLN6-216ENST00000636876 KCNE1BA0A087WTH5 132 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 LOC105369274A0A096LPK9 316 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 LOC102723532A0A0G2JNH3 316 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 TRABD2BA6NFA1 517 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 H0YGG7 62 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 H3BMH7 237 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 OR1F1O43749 312 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 SRPX2O60687 465 aaPredicted RBP15.3■□□□□ 0.04
CLN6-216ENST00000636876 UGDHO60701 494 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 MLYCDO95822 493 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 OTCP00480 354 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 CTSBP07858 339 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 TSPAN8P19075 237 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 CXCR2P25025 360 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 HPDP32754 393 aaPredicted RBP15.3■□□□□ 0.04
CLN6-216ENST00000636876 SCTRP47872 440 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 WDR4P57081 412 aaKnown RBP15.3■□□□□ 0.04
CLN6-216ENST00000636876 VSX2P58304 361 aaPredicted RBP15.3■□□□□ 0.04
CLN6-216ENST00000636876 ARF3P61204 181 aaPredicted RBP15.3■□□□□ 0.04
CLN6-216ENST00000636876 SHC2P98077 582 aa15.3■□□□□ 0.04
CLN6-216ENST00000636876 LCP2Q13094 533 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms