RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ENO1P06733 434 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 BPGMP07738 259 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PCSK2P16519 638 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 UGT2B7P16662 529 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CD1CP29017 333 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 EEF1DP29692 281 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ALDH4A1P30038 563 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PRDX3P30048 256 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 AHRP35869 848 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 HSPA7P48741 367 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ARFIP1P53367 373 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PGGT1BP53609 377 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 RPS15AP62244 130 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PHEXP78562 749 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 NAE1Q13564 534 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 RCN2Q14257 317 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PUM1Q14671 1186 aaKnown RBP eCLIP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TCEA2Q15560 299 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PFKFB4Q16877 469 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CCSMST1Q4G0I0 132 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CFAP157Q5JU67 520 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 MANEAQ5SRI9 462 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TMTC4Q5T4D3 741 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 THEMIS2Q5TEJ8 643 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 HHATQ5VTY9 493 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CDCP2Q5VXM1 449 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ATG9BQ674R7 924 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 GRHL2Q6ISB3 625 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF425Q6IV72 752 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 RGS9BPQ6ZS82 235 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 RNF44Q7L0R7 432 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ARHGAP22Q7Z5H3 698 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TMPRSS12Q86WS5 348 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 NUDCD3Q8IVD9 361 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SLITRK4Q8IW52 837 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 KIAA2013Q8IYS2 634 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 LRRC34Q8IZ02 419 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 KRT78Q8N1N4 520 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SPATA6LQ8N4H0 392 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 AFAP1L2Q8N4X5 818 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF655Q8N720 491 aaPredicted RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 C19orf47Q8N9M1 422 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 L3MBTL4Q8NA19 623 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 OR4E2Q8NGC2 313 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 OR4K1Q8NGD4 311 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 OR6Y1Q8NGX8 325 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PPP1R14CQ8TAE6 165 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 FLVCR1-AS1Q8TAF5 88 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 FAM76AQ8TAV0 307 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PPP4R1Q8TF05 950 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SLC5A11Q8WWX8 675 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 STON2Q8WXE9 905 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ADAMTS14Q8WXS8 1223 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 KLHL6Q8WZ60 621 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 RSC1A1Q92681 617 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 EXT2Q93063 718 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PTCD3Q96EY7 689 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 MED8Q96G25 268 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SLC41A2Q96JW4 573 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CNDP1Q96KN2 507 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 FCRL4Q96PJ5 515 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TMEM237Q96Q45 408 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 OR2A14Q96R47 310 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF382Q96SR6 550 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SELENOSQ9BQE4 189 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 AIF1LQ9BQI0 150 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PLCD4Q9BRC7 762 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TBC1D10AQ9BXI6 508 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SLC29A3Q9BZD2 475 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 STRADBQ9C0K7 418 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 DRC3Q9H069 523 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ABCG4Q9H172 646 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 FANCEQ9HB96 536 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 MRPS30Q9NP92 439 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 BRD7Q9NPI1 651 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PFDN4Q9NQP4 134 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 INTS9Q9NV88 658 aaKnown RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF358Q9NW07 568 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PSD3Q9NYI0 1048 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 SLC17A7Q9P2U7 560 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TRPS1Q9UHF7 1281 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 HAO1Q9UJM8 370 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ANGPTL3Q9Y5C1 460 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 PCDHGA11Q9Y5H2 935 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 WDFY4Q6ZS81 3184 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 USP34Q70CQ2 3546 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TRBV23OR9-2A0A075B6M9 112 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 KCNE1BA0A087WTH5 132 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 TRBC2A0A5B9 178 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 SERTM1A2A2V5 107 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 NCF1BA6NI72 391 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-205ENST00000636792 NCF1CA8MVU1 366 aaPredicted RBP6.45□□□□□ -1.38
UPF3B-205ENST00000636792 TAPBPO15533 448 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 B4GAT1O43505 415 aa6.45□□□□□ -1.38
UPF3B-205ENST00000636792 CCNT2O60583 730 aaKnown RBP6.45□□□□□ -1.38
UPF3B-205ENST00000636792 SRPX2O60687 465 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms